Rhinichthys klamathensis goyatoka (western speckled dace): 130087083
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Entry
130087083 CDS
T09701
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130087083 (smarcad1b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130087083 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
HHH_3
Pyr_excise
CUE
Motif
Other DBs
NCBI-GeneID:
130087083
NCBI-ProteinID:
XP_056109255
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MRRKKGQSASSHHVDPSEPDTIIPETPETKRPSGSSFSTALSDSDSDIEISGSSMMPVRQ
VERKKKASSSEDELSLSDEEEVTVVKMERRLKHNRTTRSTSQAPQTQQKGSRMVTNSAHP
SPLKTSGMAASDSVQERREQQMCGTSQESDRRKRRASEMDDSEEEGPEPGSKDQERMLRK
LQRKFPHLNKNELRDVLQEHSWLIEDALETLRMFSDLVVESEDDASQVSTAAKRTRRVAN
TRQQAQVPQLPTSPPQPKPRRPLDGTKTPQRSAKQSVVTKNVYVSSSEECSDSEASMVNV
LLDSDSDQSDETLSKLKSEILSFFQTASADELTLIAGCSLKKAQKITELRPFKRWKDLDD
AMHRGNGLSIELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQMMNNGPGSMSQPQI
LTSTFQLKPYQLIGLNWLALLHQNKLSGILADEMGLGKTIQAISFLAYLYQEGNHGPHLI
TVPASTLDNWVRELKLWCPSFKVLVYYGSAEDRKYMRYEILNQIVDYNIIVSTYNLAIGN
NSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSL
LNFIMPSMFSSSTSQISKMFSMKSSEEQSSFERDRITQAKLIMKPFILRRVKSEVLKQLP
AKEEQVEFCAMSERQQELYNALFHKLKRSSNRERRELTNVMMQLRKMSNHPLLHRQYYTT
EKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHRLCQQYSALQEYQLDTEILLDSG
KLSLLAQLLNSQKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYIRLDGSTPMSDRIGLID
QFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKV
IKLISKDSIEDAMLRIGERKLKLEQHMTATSTEEDEEDTLPDDMTSLLKASLGL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaagaaaggacagtcagcatcctcacatcatgtggatccctcggagccagac
actatcattccagagactcctgaaaccaaacgtccatcaggatcatctttctccactgcc
ctttctgactctgactcagatattgagatatcaggcagttccatgatgccagtcaggcaa
gtagagcgtaagaaaaaagcgtcatcgtctgaggatgaactatcactgtctgacgaggag
gaagtaactgtggtgaagatggagagaagactgaagcacaacagaacaacaagatctacc
tcacaagctccacaaacacaacagaaggggtcacgaatggtgaccaatagcgcgcacccc
tcgcccctgaagacgtctgggatggcagcatctgattcggtccaggagaggagagagcag
cagatgtgtggcacttcccaggagagcgaccgcagaaagaggcgggcttctgagatggat
gattcagaggaagaggggcctgagccaggatctaaagatcaggaacgtatgctgagaaaa
ctccagaggaagttccctcatctgaacaagaatgaactcagggatgtgcttcaggaacac
agctggcttattgaggatgccttggaaacactacgaatgttctccgatcttgtggttgag
tctgaggatgatgcctctcaagtatccactgctgccaaacgcaccagacgggtcgcaaat
acccgccaacaagctcaggttccccaacttcccactagcccaccccaaccgaaaccacgc
agacctcttgacgggaccaaaacacctcaaaggagtgcaaagcagtcggtagtcacaaaa
aacgtatatgtgagctcgtctgaggagtgcagtgactctgaggcctctatggtgaatgta
ttactggactctgactctgaccaatcagatgagactctatccaaactcaaatcagagatc
ctcagcttctttcagacggcttctgcggatgagctcacactcattgcaggatgctccttg
aagaaggctcagaaaatcaccgagctgagaccctttaaaaggtggaaagacctggatgat
gccatgcacagaggaaatggtctttccattgagctgctggctggatgtcgggaggttctg
aaggaaagggaagttgttaaaggtctcatgagcaagtgcgaggagatatctgtaaaactg
atccaagacgtgacccaaatgatgaacaacggcccgggctctatgagccagccccagatc
ctcactagcacattccagttgaaaccgtaccagctgattggactgaactggctggcttta
ctacatcagaacaaacttagtggaatcctggcagatgagatgggtttggggaagaccatc
caggccatctcgttcctggcatacctctatcaggaagggaaccatgggcctcatctgatc
accgttcctgcttctacacttgataattgggttcgggaactgaaactttggtgccccagt
ttcaaagtgcttgtatattatgggtctgctgaggatcgcaagtatatgcgctacgagatc
ctgaatcaaatagtggattacaacatcattgtctccacttacaacctggctattggaaat
aacagtgaccgcagcctgttctgcaagctcaagctggagtatgccgtgttcgacgaaggc
cacttgctgaagaacatgaactcgctgcgctaccgacacctcatggccatcaacgccaaa
tatcgactgctgctcactggaaccccactgcaaaacaacctactcgagctcatgtccctg
ctcaacttcatcatgcccagcatgttctccagcagcacttcacagatctccaagatgttc
tccatgaaatcttcagaggagcagagcagttttgagagggacaggatcacccaggccaag
cttatcatgaaacccttcatcctcagacgtgtgaagagcgaggtcctgaagcagttgcct
gccaaagaggagcaggttgaattttgtgccatgtccgagaggcagcaggaactctacaac
gctcttttccacaaactgaagcgctccagtaatagagaaagacgtgagctgaccaatgtg
atgatgcagctgagaaagatgtccaaccatccgctccttcaccggcagtattataccaca
gaaaaactcaaagccatgagcaaactcatgctcaaggagccgagtcaccgtgacgcagat
cccgctctcatcaaagaggacatggaggtgctctccgacttcgagttacaccgcctctgt
cagcagtattcggcactgcaggaataccaactcgacacagaaatactgctggactcgggg
aagctcagcctcctcgcacagctgctgaactcccagaaggagaagggggatcgagtggtg
ctgtttagccagttcacaatgatgcttgacattttggaggtgttcctgagacaccataag
cacagatacatccggctggacggttcaacgcccatgagtgacagaattgggctgattgac
cagttcaacacagaccaggacatatttgtgttcctgctgtccaccagagccggaggactg
ggcattaacctgacttctgccaatgtggtcatccttcacgatatcgactgcaacccttac
aatgacaaacaggcagagggccgctgccaccgggtgggacaaaccaagacggtgaaggtg
atcaagctgataagtaaggactccatagaggacgccatgcttcgaattggagaaagaaaa
ctcaaactagagcagcacatgaccgcaacttcaaccgaggaggatgaagaggacacgtta
cctgatgatatgacctcactgctcaaagcttctcttggactctga
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