Rhinichthys klamathensis goyatoka (western speckled dace): 130087106
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Entry
130087106 CDS
T09701
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130087106 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130087106 (depdc5)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
130087106 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
130087106
NCBI-ProteinID:
XP_056109291
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MTVTIKANKAYKLVVHKKGFGGSDDELMMNPKVFPHVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQ
MSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYLAKSLEEFPE
MQRASVRQDHDGRYYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKVADGYPCG
HNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQR
MIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQNSC
SCFTPRIKLAGKKAQAEKARSSKEHSLGSPKDAENSLPIQVDYDAYDAQVFRLPGPSRAQ
RSTNFRSSRERESASRKSWGSSDVGGGGMGSSPPTRPTGPDEQRSLASDDSLGHISNILL
IPRPSQGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHVRPGGYTPQ
RALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDPART
SAELLELAYHEATGSKRTASRYVGENGLYISGVPDNVSGSPASSNSTGTPVNRGSFEDYS
SSLDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLL
PHTDLDRRDDESPVMTAHQVFEEFICQRLMQGYQIIVQPNRKPQPAIAPPLSSSPLYSRG
LVSRRKPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHAD
AHFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDVYGEGAGAGRDGLSGNGDWSLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKG
LQVTGALSSYNPEPIAPPVGKKGTSALSALLELDQTQKSLEEQQLAAQHGGKPCGPFSEA
ASVALTTTYVDSPRKDAAFILDFIRSPRSSYICHSQLPAEQVPANSIEGGLSDKGGNQPG
ERTSAMSQATGDPTPGTGSETGGQSGSGGLSLSSSSTLMEILEAIKHPTTGVQLLPEQRG
LPPNCFVSAEVVHWLVSTVENVATQGIAVEIMQKMLDEGLITHASGDAMRTFVYGFYFYR
IVDKDSEKAPTTQLPPAGANVWSAAALEDFALFQRKWFEVAFVMEERRPCDLPAFLLPWL
PSRPASYASRHSSFSRSFGGRSQAAALLAATVPDQKTVTLDVDVNNRSDRTEWCSCYYHG
NFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLR
AQLFIPLNIQCLLKEGCDNLFEGFEPETYWDRMQLFQEAVLSRFGFVQDKFSTSAFNFPS
ENKPQYIHVTGTVFLQLPYSKRKYSSGQRRRRNSTASASQSLFGSEERVGYNWAYNTMLT
KAWRTGVLGDEKLADRLLRDFTDFCANKDNRLVTFWESCVEKMNASAP
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaccattaaggctaacaaggcttacaagcttgtggtgcacaaaaagggcttt
ggaggcagtgatgatgagttgatgatgaatcctaaagtctttcctcatgttaaactgggg
gatattgttgagattgcacatccaaatgatgagtacagtcctctgctgctgcaggtcaag
agtttaaaagaagacctgcagaaagaaactatcagtgtagatcagacagtggctcaggcc
ttcaagcttcgtgcctaccaggacgtcatcatcaatattgtagatccaaaggatgtgact
ttggatctggtggagctcaccttcaaagatcagtatattggacgaggagacatgtggaga
ctgaagaagagcttagtgagcacatgtgcgtatgtgacacagaaagtagagtttgcagga
atcagggcccaggccagtgaattgtgggttaaaggagagaaggtcacttgtggctatatt
agtgaagatacaagggttgtttttcgatccacctctgcgatggtttatatattcattcaa
atgagctgtgagatgtgggactttgatatctatggtgatctttactttgagaaagctgtc
aatggtttcctctccgatctgtttgctaaatggaaagagaagaactgcagtcatgaggtt
acagtagtgctgttctctcgaaccttctacttggccaaatcactggaagagttcccagag
atgcaaagagcgtcagtccgacaagaccatgatgggcggtattatgaggatttctacagg
gtggtggcccaaaatgaaagacgtgatgagtggacgtctctgctcatcaccattaagaag
cttttcatacagtatcctgtactggtgcgtcttaaagtagcagatggatatccatgtggg
cataattccacttctgctcagggaaattatctggaagctataaacttgtctttcaacgtc
tttgataagcactacatcaaccgtaactttgatcgtacgggtcagatgtcggtggtcatt
actccaggagtgggcgtgttcgaggtggaccgcttgctcatgatactcaccaaacagcgc
atgatcgacaatggcatcggtgtagatctggtatgcatgggagagcagcctctccacgct
gttccactcttcaagttacataaccgcacagtgcacggagactccagaattggcgatgac
tacaacctgcctcactggatcaaccatagcttttacacatcaaaaagccagaactcatgc
agctgttttacaccacggatcaagctggctggaaagaaggctcaagctgaaaaagccaga
agcagcaaagaacattctcttggttctccaaaagatgccgagaacagccttccaatccag
gtggattatgatgcgtacgatgctcaggtcttcagacttcctgggccctcgagagcccag
aggtccaccaacttcaggtcgagtcgggagagggagtcagccagcaggaaaagctggggc
tcatctgatgtcggtggaggcggaatgggcagctctcccccaaccaggcctacaggacca
gatgaacagaggagcctggcgtcagatgacagtttgggacacatctccaacatcctgctc
atcccacgcccgtctcagggccaatacgaggtcagcagctccctggggtacaccagctgc
acaagagaattgctggaaaagatggtagaatcccagagggactccagtgctccgggccgc
ttcacggtgggcagcgctgagtccaccctgcatgtacggccgggcggttacacgccccag
agggccctcatcaacccgttcgccccctcacgtatgcctatgaaactcacctccaaccgc
cgccgctggatgcacacgtttcctgtcggtccttctggagaggcaatccagatccaccat
cagacgcgacagaacatggcagagctgcagggcagtgagcagagagacccggctcgtacc
tctgcagagttgctggaactggcctatcatgaagccacgggaagcaagcggacagcgtcc
cgttacgtaggggagaatggactgtacatcagcggagttcctgacaatgtatctggaagt
ccagctagtagcaacagcactggaacgccagtgaaccgtggttcctttgaggattattcc
agcagtctagatccgatcctgctgctgtctgcccctccgacagtgcctagtttttgctgc
acggtcggggtggactggaagtccctcaccactcctgcctgcctccccctcacgactgat
tactttcccgaccgccaaaccctgcagaacgactacacagaaggctgctacgacctgctg
ccacacactgacctggacagacgtgacgatgagtctccagtgatgacggcccatcaggtg
tttgaagagttcatctgtcaacgactgatgcaaggttaccagatcattgtacagccaaac
aggaagccacagcctgctatagccccgcccctcagcagcagccccctttattccagaggg
ctggtgtctcggcgtaaaccagaggaggaagagagtctttactggctcagtatggggaga
acctttcataaagtctgccttaaagataagatcattaccgttacccgctacctcccaaag
tatccatacgaatccacacagattcagtacagctacaatctgtgccctccgcacgctgac
gcccacttcctgccattctgggttgagttcagccacgagcggctggaggagtacaaatgg
aactacctggaccagtacatctgctctgccggctcagaggacttcagtcttattgactct
ttgaagttctggcgcacacgcttcttgctgctgccagcgggtggagccaggcgagtggcg
gatggtgagggtcactgggacgtgtatggggagggggcgggggcagggcgggatggtctc
tctggcaatggggactggtctcttttggatggatttatccgctttttggaaggcctgaac
aggattcgccggcgccatcgatctgatcgtattattcgtaaaggagctactattaaaggc
ctgcaggtgacaggggccctttcttcctacaacccggagcctatcgcaccccctgtgggc
aaaaagggcacctctgccctctctgcacttctggagctggatcagacacagaagagttta
gaagagcagcagcttgctgctcagcatggtgggaaaccatgtggacctttcagtgaagcg
gccagcgttgccctgacaaccacctatgtcgatagcccccgtaaggatgctgccttcatt
ttggactttattcgtagtccacgttcctcctacatctgtcactctcagctgcccgctgaa
caggttccagcaaattccattgagggtgggctatcagacaaaggaggaaaccaaccaggt
gagagaacatctgctatgtcccaagccacaggagacccaaccccaggcacaggttcagag
actggggggcagtcagggtccggtggtttgagtctttcctcatcttccacactaatggag
atcctggaagccattaagcatcccaccactggagtgcagcttttgccagagcagaggggc
ctgcctcccaactgctttgtcagtgctgaggttgtacattggctggtgagcactgtggag
aatgtcgccacacagggcattgcagtagaaatcatgcagaaaatgttggatgaaggtcta
attactcatgcctccggtgatgccatgagaacctttgtctatggcttctacttttaccgg
attgtcgacaaagacagcgagaaggcccctacaactcagttgcccccagctggagccaac
gtatggtctgccgcagctttggaggactttgccctgttccagaggaagtggtttgaggtg
gcctttgttatggaggaacgtcggccctgtgacttaccggccttcctgctaccctggttg
cccagccggccggcctcgtacgcaagtaggcatagttccttcagccgcagcttcggagga
cgcagccaagctgctgcactgctagctgccacagttccagatcagaaaacagtcaccttg
gacgtcgatgtgaacaatcgcagtgatcggactgaatggtgcagttgctactaccatggc
aacttctccctcaatgctgccttcgaaatcaagctgcactggatggctgtcactgcagct
gtactctttgaaatggtgcaaggctggcacagaaaggcggcatcttgcggattcctgctt
gtacctgtgttggaggtgcccttcgctttgtcatcatacctatatggcgaccctctccgt
gctcagttgtttatccccctaaacatacagtgcctactaaaggagggctgtgataacctg
tttgaggggtttgagccagagacatactgggacagaatgcagttgtttcaggaggccgta
ctctccagatttggctttgtgcaagacaagttctcaacgtcagcttttaactttccatca
gagaacaaaccccagtacatccatgtaacaggtacagtttttcttcagctgccttactcg
aaaaggaaatactccagtgggcagcggcggcgccgtaactccacggcctccgccagtcag
agcctgtttggttctgaggagcgagtgggctacaattgggcttacaataccatgctgacc
aaagcctggagaactggtgttcttggggacgagaaactggccgaccgcctgctacgggat
ttcacagacttttgtgccaacaaggataatcgactggtgaccttctgggaaagttgtgtg
gagaaaatgaatgccagtgccccttga
DBGET
integrated database retrieval system
