Rhinichthys klamathensis goyatoka (western speckled dace): 130087132
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Entry
130087132 CDS
T09701
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rkg01100
Metabolic pathways
Module
rkg_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130087132 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130087132 (csgalnact1a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
130087132 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
130087132 (csgalnact1a)
Glycosyltransferases [BR:
rkg01003
]
Glycan extension
O-Glycan
130087132 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
FAM184
ATG16
CCDC93_CC
Fib_alpha
Tektin
Sos7
EzrA
Csm1_N
RmuC
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
130087132
NCBI-ProteinID:
XP_056109333
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MVHTDAPTLLNYIFLPALLLRLSVVMLRRGLLFWLSRVGVLLVVVCCCLSLLYVISCSPH
ADEPMAGQPLPRPGGMAIAGGPSRPGGVGGAPIGSAGREGFQALLQEREEQHRQHIASLK
KQIAQLKEALQERSEQLKGMQNSLEKTAGRGTGGDVADERSHSDLQEFLRSQLSRAEVHS
GVRLPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDRRDELGEVVESALQSLNAPY
QGGDRMKASKVYTPSDFIEGIARTEKDKGTLYELTFRGEQKLEFRRLVLFRPFGPLVKVK
SELVETANMPINIVLPLSQRADKFKQFMHNFREVCVKQDGRVHLTVVYFGRDQMNEVKGT
LENTSRELNFRNFTLIQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIFFTADFLNTCR
LNAQPGKKVFYPVLFSQYNPAVIYGSHDHTPAVEQQLIIKKDTGFWRDFGFGMTCQYRSD
FINIGGFDVDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKRCADELPPDQYKM
CMQSKAMNEASHGQLGMLLFRHEIEAHLRRQKQRSGAKKA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggtacacacagatgccccaactttattgaactacatcttcttacccgccttgctgttg
aggttgtcagttgtgatgctgcgcaggggtctgctgttctggctctctcgtgtgggtgtt
ctgttagtggtggtgtgctgttgcctttccctcctttatgtcatctcttgcagcccccac
gctgatgagcccatggctgggcaaccccttcccaggcctggagggatggctattgctggg
ggtccgagcaggccaggtggtgttggaggtgcccctattggctctgctggacgggaaggg
tttcaggccctgcttcaagagcgggaagagcagcaccggcagcatattgccagcttgaaa
aaacaaattgctcaacttaaagaggctctccaggaacggagcgaacaacttaagggcatg
cagaactctttggagaagacggctgggaggggcacggggggtgacgtggctgacgagcgc
agtcacagcgacctgcaggagttcctacgcagccagctgagccgggctgaggtgcacagt
ggggtgcgactgccgagcgagtacgctgtggtgccctttgagagcttcaccttacaacgc
gtctaccagctggaaatggggttgacccgtcaccccgaggagaagccggtgaggaaggac
cgcagggacgagctgggggaggtggtggagagtgcgctgcagtccctcaatgcaccgtat
caaggtggagacagaatgaaagccagtaaagtctacacaccatcagactttatagaaggc
atagcgcgcactgaaaaggacaagggcacgctgtacgagctgaccttccgcggcgagcag
aaactggagttccgcaggctggttctcttccgccccttcggccccctcgtgaaagtgaaa
agtgagcttgtggagaccgccaacatgcccattaacattgtgctgcctctgtcccaaaga
gccgacaaattcaaacagtttatgcacaacttcagagaggtgtgtgtgaagcaggacggg
cgggtgcacctcaccgtggtttactttggaagggaccagatgaacgaggtcaaaggaacc
ttggagaacacatcgagggagctgaacttccgtaacttcactctgatccagctgaatgag
gagttttctcggggacgagggctggatgtgggcgctcgtgcctggaagggaggcaatgtc
ctgctcttcttctgtgacgtggacatcttcttcacagccgacttcctgaacacatgtcgt
cttaatgcccagcccggaaagaaagtgttttacccagttctcttcagccagtacaatcca
gctgtaatctacggcagccacgatcacacccccgccgtggaacagcagctgatcattaaa
aaggacactggcttttggagggactttgggtttggaatgacctgccaatacagatccgac
ttcatcaatatagggggtttcgacgtggacattaaaggctggggcggcgaggacgtgcac
ctgtacaggaagtacctccacagtaatctactagtagtgcgcgccccgtcccgcggcctc
ttccacctgtggcacgagaagcgctgcgcggacgagttgcccccggaccagtacaagatg
tgcatgcagtccaaggccatgaacgaagcctcgcacggccagctgggaatgctgctcttc
cgacacgagatcgaggctcacctccgcagacagaaacagagaagcggagccaaaaaagcc
tga
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