Rhinichthys klamathensis goyatoka (western speckled dace): 130087198
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Entry
130087198 CDS
T09701
Symbol
viml
Name
(RefSeq) vimentin like
KO
K07606
vimentin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130087198 (viml)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130087198 (viml)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130087198 (viml)
04147 Exosome [BR:
rkg04147
]
130087198 (viml)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
130087198 (viml)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130087198 (viml)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130087198 (viml)
Exosomal proteins of other cancer cells
130087198 (viml)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
KASH_CCD
TolA_bind_tri
BLOC1_2
TPR_MLP1_2
DUF1664
DUF4515
Motif
Other DBs
NCBI-GeneID:
130087198
NCBI-ProteinID:
XP_056109402
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MSTSSYRKRFGDVSRSSAFSSRQTSSSVRSRVSFGVSSAPVIYASKSSRVRSSVGMPRLT
SETVDFSLSDALNTEFKANRLSEKAQMQSLNDRFASYIEKVRFLEQQNKILSAELEQLRG
QRSSSIADLYEEEMRDLRRQVDQLITEKTRVEVTRDNLAEDMERLREKLQDEILQREDAE
NSMRSFRQDVDNAALARVDLERKVESLQDELAFLKKLHDEELVELQAQIQGQQVQVDMDM
AKPDLTAALRDVRLQYENLATKNIQESEGWYKSKFADLTEAANRNNEALRLAKQEASEYR
RQVQALTCEVDALKGTNESLERQMREMEENFAMESSSSQDNIARLEEDLRSMKDEMGRHL
HEYQDLLNVKMALDIEIATYRKLLEGEESRIAPPLPNFSSFSLRDMMLESKPVTENTFTK
KVLIKTIETRDGQVINESTQNHDDLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcctcctacagaaagcgttttggagacgtgagccggagcagcgcgttctcc
agccgtcagacctccagttccgtgcgctcgcgggtgtccttcggcgtctcctcggctccg
gtcatttacgcgtccaagagctccagagtccgaagtagcgtggggatgccacgactgacc
tcggagactgtggactttagtctctcggacgccttaaacacggaattcaaggcgaatcgg
ctcagtgaaaaggcgcagatgcagtcactgaacgaccgcttcgccagttacatcgagaag
gtgcgtttcctggagcagcagaacaagatcctgagcgcggagctggagcagctgaggggc
cagagatcgtccagcatcgcggatctgtatgaggaggagatgcgcgacctgaggcgacag
gtggaccagctcatcacggagaaaacacgcgtggaagtcacgcgagacaacctggcagaa
gacatggagcgtctcagagagaaactgcaggatgagattcttcagcgagaagatgcagag
aacagcatgagaagtttcagacaggacgtggataacgctgctcttgctcgagtggatctg
gagaggaaggtggagtctctccaggacgaactcgccttcctgaaaaagctccatgatgag
gagctggttgagctgcaggcacagatccagggccagcaggtgcaggtggatatggacatg
gctaaacctgatctgacagctgctctgagagacgtcaggctgcagtatgagaacctggca
accaaaaacatccaggagtcagagggctggtacaaatccaagtttgctgacctgacagaa
gcggctaacaggaataatgaagctctgcgattggccaagcaggaggccagtgaataccgc
cgtcaggtgcaggcgctcacctgcgaggtggacgccctcaagggaacaaatgaatctctg
gagcgtcaaatgagagagatggaggagaactttgcaatggagtcatctagttcccaggat
aacatcgctcggctggaggaggacttacggagcatgaaggacgagatgggaagacacctg
cacgagtatcaggacttgctcaatgtcaagatggccctggacattgagatcgccacctac
aggaaacttctagaaggggaggagagcagaattgctccccctcttccaaacttctcctcc
ttcagtctgagagatatgatgctcgagtccaagcctgttactgaaaatacatttactaag
aaagttcttattaagaccattgagaccagagatggccaggtgatcaatgagtccactcag
aaccacgatgacctggagtga
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