Rhinichthys klamathensis goyatoka (western speckled dace): 130087280
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Entry
130087280 CDS
T09701
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130087280 (sorcs3a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Others
Others
130087280 (sorcs3a)
Endosome - Lysosome transport
130087280 (sorcs3a)
Endosome - Golgi transport
130087280 (sorcs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130087280
NCBI-ProteinID:
XP_056109508
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MPSECHFENVASICRSTDYGSTYERLNDKVGVKTVLSYLYVCPTNKRKIMVLTDPEFESS
VLISSDEGASYQKYRLSFFVLSLLFHHTQEDWALAYSHDQKLYSSFDFGRKWQLVHERVT
PNRFYWSVSGLDKELDLVHMEAHTPDGHCQYVTCRAQACSESSKTHPFSGYIETNSLVVQ
DEYVFVQVTTTGRASYYVSYQREQFVRIKIPKYSLPKDMHIVSTDQGQVFTAVQEWNQND
TYNLYISDTRGVYFTLALENVRTSRGLGGNSMIDLYEAAGIEGMLIANRKVENQVKTYIT
YNKGRDWRLLQAPATDLAGNPIHCVLPFCSLHLQLQMSENPYLSGSISTKSSAPGVIVAT
GNIGSELSYNNVAMFISSDAGNNWRQIFEEEHNVWFLDKGGALIAVKQPTVPTRHLWISF
DEGRQWTRHSFSAMPLFVDGVLVEAGAENHIMTFFGHFSHRSEWQLIKIDYKSIFSRRCT
EGDYQTWHLHNQGEPCIMGQKQIYMKRRPGNYCMVGWDNSRILSAEPCICRAHDFECDYG
FERRGDGNCLPAFWFNPSMVSRSCSQGQNYLNSTGYRKVVANNCTKGVKEMYSARKQQCP
NRPPRGLVLTTRDDKLTANLGSNVTFLLRLEEGDSVRTNIQLDFGDGTAVSYSNLSWTQE
GIRHVYRSAGIFRVTALAENSLGSDTSSLYLHVTCPVEHIQLLAPYVVIKNKEVNLTAVV
WPSHFRTLTYFWWLGNNTEPIITLDSSISHTFSSEGMITVTVQVSSADSILQDTRTIAIQ
EFFKSLLLSFSPNLDEANPDIPEWRQDVGRVIKKSVLQVADVPEEQLLVAVFPGIPTAAE
LFLLPPGNQSDGRKRTEEDLEQISEILVNALNQISLEFELKPGSRVIVYITQLTLAPLVD
SIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMINTVGQNDAT
PKITLSELMEKELEARAKRGVINTCESTREIPNCTSV
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaatgccattttgaaaatgttgcttctatttgcagatcaactgattatggc
agcacttatgagaggctgaacgataaagtgggagtcaaaaccgttttgagttacctctat
gtctgccccaccaacaagagaaagataatggtgctgacggacccggagtttgaaagcagt
gttctcatcagctcagatgagggtgccagttatcagaagtaccgcttgagcttcttcgtt
ttaagtctgcttttccatcacacacaagaggactgggcattagcctacagccatgaccag
aagctgtatagctcgtttgactttggccgaaagtggcagctagttcatgagcgagtgact
ccgaaccgcttctactggtcagtatccggtctggacaaggagttagatctagtgcacatg
gaggcccacactcccgatggccattgtcagtatgtgacatgcagagctcaagcctgctct
gaatccagcaagacacatccattttctggatatattgagaccaactcactcgtggttcag
gatgaatacgtgttcgttcaggtgacgactactggcagagcgagctactatgtatcctat
caaagagaacagtttgtacgcatcaaaatccccaaatactcccttccaaaggacatgcat
attgtgagcacagatcaaggtcaggttttcaccgccgtccaggagtggaaccagaacgac
acctacaacctgtacatatctgacacgcgtggggtgtacttcaccttggccctggaaaac
gtcaggaccagccgtggcctcggaggcaacagcatgatcgacctttacgaggcagcaggg
attgaaggtatgctcatcgctaataggaaggtggagaaccaggtgaagacgtacattact
tacaacaagggccgcgactggaggcttttgcaggcgcctgctactgacctggctggaaat
cccattcattgtgtgctgccgttttgctcgctgcacctacaactgcagatgtcagagaac
ccgtacctctcaggctccatctccaccaagagctcggcgccgggagtcatcgtggctaca
ggaaatattggctccgaactgtcttacaataatgtggctatgttcatttcatcagacgca
ggcaataactggagacagatttttgaagaagagcacaacgtgtggtttttggacaaaggt
ggagctttgattgctgtgaagcagcccactgtgcccactagacatctttggatcagcttc
gatgaaggtcgtcagtggactcgtcacagtttctcagccatgccgctgttcgtggatggt
gttttggtggaggcaggtgcagaaaatcacatcatgacgtttttcggacacttcagccac
cggtctgaatggcagcttatcaaaattgactacaagtccatattttccagaaggtgcaca
gagggagactaccaaacctggcacctgcataaccagggtgagccatgcataatgggtcaa
aagcagatctacatgaagcgtcgtcctggaaactactgcatggtgggatgggacaactcc
aggatcctttctgcagaaccctgcatctgcagagcacatgactttgagtgtgattatggc
tttgagagaagaggagatggaaactgtctgccagcattttggttcaacccttccatggtg
tctcgaagctgcagccaagggcaaaactacctcaacagcacagggtatcgtaaagtggta
gcgaataactgcacaaaaggagtgaaggagatgtactcggccaggaaacagcagtgtccg
aaccgccccccacgaggtttagtcctgacaacccgtgacgacaagctcacagccaacttg
ggcagcaatgtgaccttccttctgcgactggaggagggcgactccgtgaggacaaacatt
cagctggactttggggacgggacggcggtgtcctactctaacctgagctggacgcaggag
ggcatcaggcacgtgtaccgcagtgctgggatcttcagagtaacagcgctggcggagaac
agcctcgggtccgacacctcatccctctacctgcatgtgacgtgccctgtggaacatatt
cagctgttggctccatatgtggtcattaagaataaggaggtgaacctgacggcagtggtc
tggccttctcatttcagaacgctcacctatttctggtggctggggaacaacactgagcca
ataattacgttggacagcagtatttcccacacgttcagcagcgagggcatgatcaccgtg
acggttcaggtctcgtcagcggactcgatactgcaggacaccagaaccatcgccatacaa
gaattcttcaaatcgcttcttttatctttctctcctaatctggacgaggccaaccccgac
atcccagagtggagacaggatgtgggccgggtcattaagaagtctgttcttcaggtcgct
gacgttccagaagaacagctgctggtggccgtgtttcctggcatcccgactgctgcggaa
ctcttcctgcttcctcctgggaaccaatcggatggcaggaaacggacggaggaggatctg
gagcagatatcagaaatcctagtcaatgcactgaatcagatctcgctggagttcgagttg
aaacctggctcccgggtcatcgtttacatcacgcaattaactttagctcctctggttgac
tccatcccaagacacagcagttctgcaatgctgatgcttctgtcggtggtgtttttgggc
ttagctgtatttctcatctacaaatttaagagaaaaatcccctggattaacatctacgcg
gaggtaaaccatgagaaagagcaggagatgatcaatacggtgggccagaatgacgccaca
cccaaaatcaccctgagtgagttgatggagaaagagttggaggcccgtgccaaacgtgga
gtgatcaacacctgtgaaagcacaagggagatcccgaactgcacgagtgtctga
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