Rhinichthys klamathensis goyatoka (western speckled dace): 130087288
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Entry
130087288 CDS
T09701
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130087288
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Others
Others
130087288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130087288
NCBI-ProteinID:
XP_056109514
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MERGIRYCRVNVSAFCTLLLVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMESGVDSG
KVSGENGDGSTALFNSAGAETAQPDRGATEHGEHAHSVRKRNTDRLLSEKMPPDDKWKSM
RSNGKVYNLKRAGSQGSAPGDHHHRVRRSTQGPGSPAGARPAPTVGNSTAPAARRVRRSE
LRWSREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLG
SVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSD
EGATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYW
SKLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFV
QVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYV
SESGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKINNEVKTHITYNKGRD
WRLLQAPSADLRGNRIHCILPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAE
LTSSNVSMFITPDAGNTWRQIFDEEYSVLHLDQGGALVAIRHTPLPIRHLWLSFDEGRVW
NKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVP
WDLHDQGERCLMGVKRVYRKLKAIARCVMGKTYSVTMISEPCDCTESDFECDYGFERKTD
GKCTPAFWFPPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPRQAPRG
LHLVTSEGKLTATLASNVTLLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIY
KNVGIYRVSATAENSLGSETVLLFLHITSGHLESVHLSAPFVAVKNKEVNLTVVLWPSQV
GTVTYIWWFGNNSEPVITLEGSVAFTFSREGISVVTVQVSAGNNILQDRKTVAVHEYFRS
HLLAFSSNLDDHNPDVSEWRLDVSRVIKTSMVQATGVNPEQLLVTVLPGLPTAAEFFLLP
DKQLTEGKPDKTATHLDQLSELVLSALNQNLVRFTLRPGVQITVYAAHLSAAPLVDTSEN
HSGSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHIYAAMQDEKEQEMIQSPVSPTDSTPSC
SSQRELLTPLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggagagggggatcagatattgccgggttaatgtcagtgctttctgcaccctgcttttg
gttttgttcgcctgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctg
ctggataagtggagcggtcgggaattattggtgaggatggagagtggtgtcgactctggt
aaagttagtggggaaaatggagacgggtcaacggcgctgtttaattcggctggtgctgaa
actgctcagcccgaccgcggagcaaccgaacacggcgaacacgctcactctgtgcgtaaa
aggaatacagacaggcttctctcagagaaaatgcctcccgatgataaatggaagtcgatg
cgcagtaatggcaaagtttataatctcaaacgggcaggttctcaaggttcagcccctgga
gatcaccatcaccgagtgcgtagaagcacccagggacccggctcgcccgcaggtgcgcgc
cctgcgccgactgttggcaacagcaccgcgccagctgcgcgccgagtccgccgctctgag
ctgaggtggagcagggaagagcggagaacggccacatcacgacaggaggagctgaaactt
accagctctacctttgcactgacaggggattccgctcacaaccaagccatggtgcactgg
tccggccaaaacagcagcgtgatcctcatgctgaccaaactgtacgacttcaatctggga
agtgtcacggaaagctctttatggaggtcaacagattacggaaccacttatgagaaactc
aatgaaaaggtgggcgtgaagaccatcctcagctatctgtacgtcagccccaacaacaag
cgcaagatcatgttgctgacagatccagaggtggaaagcagtttgctcatcagctcagat
gaaggcgccacctatcaaaaataccgtctcaacttctacatcctcagcctgttgttccat
cctgagcaggaggactggatccttgcttatggccacgaccagaagctctacagctctgtt
gagtttggccgtcgatggcagcttgttcacgagcgggtggcgcccaatcgattctactgg
tctaaactgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagaa
acacaggctctgtatgtcacatgtaaacttcagaactgcacagatgccaacaagggcaaa
ccttttcctggatacattgaccccaactccctggtggtccaagatgagtatgtgtttgtc
caggtgtcaaccggtggtcggccaatctactatgtgtcatccaggcgagatgtgtttaca
cccatgaagcttcccaaatacacccttccaaaggatctgcacgtgatcagtacagatgag
aaccgggtcgtggcggcggttcaagagtggaaccagaatgacacttacaacctgtatgtg
tcagagtccggaggcatttactacacactggctttggagaacgtcatgagcagcatgggt
ccagagggaaatgtcatgatagatctatacgaggtggcagggataaaaggcatgttcctg
gccaataagaagataaataatgaggtgaagacacacataacctataataaaggccgagac
tggaggctcctgcaggctccctcagctgatctcagagggaaccgaatccattgcatactg
ccgtactgttccctgcatcttcacctgcacgtatcagcaaacccgtacacatctggaaat
atagccagcagagagtcagctcctggaatcatagtggcatcaggttcaattggcgcggag
ttaacgagcagcaacgttagcatgttcatcacacccgacgctggaaacacgtggcggcag
atatttgacgaagagtacagtgttctgcatctggaccaaggcggagctttagtagctatt
agacacacccctcttcccatcaggcacctctggttgagctttgatgaggggagagtgtgg
aacaaatacagtttcacttcatctcccctgtttgtggacggggtcttgggcgaaccaggc
gaggagacgctcattatgacgatcttcggtcatgtcagtcaccgctcagaatggcagctg
gtaaagatagacttcaggtctatctttaacagaagatgcatagagtctgactatgtcccg
tgggatttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaag
ctgaaggccatagcaaggtgtgttatgggtaaaacctactctgtcacgatgatttccgag
ccgtgtgactgcactgagtcggactttgaatgtgattatggtttcgagagaaagactgat
gggaaatgtactccagcattctggttccccccctcctccatgtctcggacctgtaccaca
gagcacacgttcctcaacagcactgggtacagaaaggtggtgtctaacaactgcaccggt
ggggtgatggagcagtacacggctcgtaggcagctgtgccctagacaggcccctcgcggc
ctccacttagtgaccagcgaagggaagctaacagctactctggccagcaacgtcacctta
cttgtgttcctggaggagggtgatggatctaaaaccagcatcacggtggatttcggtgat
ggaaacgccttcacctactccaacgtgagctctattgaagatggcattaaacacatctac
aagaacgtgggaatctaccgagtgtcagccacggcggagaacagtctgggctctgaaact
gtgctcctcttcctacacattacatcaggtcatctggaatctgttcatctctccgcccct
tttgtcgctgtgaaaaataaagaagtcaatctgacggtggttctctggcccagccaagtg
ggaacggtcacctatatctggtggtttgggaataattcagagcccgtgatcacgctggag
gggagtgtggcgttcacgttctctcgagagggaatcagtgttgtcactgtgcaggtttcc
gccgggaataacatcctacaagacaggaaaaccgtcgctgtccatgaatacttcagatct
catcttcttgccttttcatccaatctggatgatcacaaccctgatgtgtccgaatggaga
cttgatgtgagccgagtcattaaaacctctatggtgcaggcgacaggagtgaatcctgaa
cagctgttggtcactgtgttgcccggacttcccacagcggccgagttcttcctgttacca
gacaaacagctgacagagggcaagccagacaaaactgctactcatttagaccagctctca
gaactggtgctcagtgctctgaatcagaatctggttcggttcacactcagaccaggagtc
cagatcacggtatacgctgctcacttatcagcagcgcctctagtggacacaagcgagaat
cacagcggctcagctatgctcatgctcctctctgtggtggtggtgggtttagcagtgttc
ctcatctataaattcaaaaggaagatcccaggcctccacatctatgcagcgatgcaggac
gaaaaagagcaagaaatgatccagagtccagtttctcccactgacagcacacccagctgc
agttctcagagagagctgctcacaccactggaacctctggacactgagcccaacacccag
accatcgaatgcatcaaacctcatccacgcgtcaaattctcatcagatcttcctacgtac
atcgacgtttga
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