KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130087294
Entry
130087294         CDS       T09701                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    130087294 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rkg03021]
    130087294 (taf5)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130087294 (taf5)
Transcription machinery [BR:rkg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     130087294 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     130087294 (taf5)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     130087294 (taf5)
    STAGA complex
     130087294 (taf5)
    TFTC complex
     130087294 (taf5)
    SAGA complex
     130087294 (taf5)
    SLIK complex
     130087294 (taf5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st TFIID_NTD2 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_DCAF12 WD_LRWD1 WD40_like VPS8_N PROPPIN LisH_TPL LisH_PAC1
Other DBs
NCBI-GeneID: 130087294
NCBI-ProteinID: XP_056109523
LinkDB
Position
Unknown
AA seq 743 aa
MAALQDGPMELDAEKETKPEILSDGTSNLSGNTGNGALSSSPLTAAPAGGAPKQEDQQTL
IAVLQFLKRNKLSESVEILRREAGLAEDQVDSLAADGGGGGKGDGDGGDANSLLSRVSIT
AAAAPQSTLTPVPVKKDHPDVRVVLSAYSQQGDPSLYQVYYSDLKNFIESVLDCHRAELS
QLFYPLFVHMYLELVYNNNETKAKAFFDKFSGDQECYYLDDLRVLCGLSKKEHMKGNEAL
LDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKGQIDSMSG
SLGGEAKREVNKAKVFYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSIGSKSKKQ
DPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPENLPSICFYTFLNAYQGLTAVD
FTDDSSLLAGGFADSTVRVWTVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTASESK
ILHGHSGPVYGVSFSPDRNYLLSSSEDSTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPFG
YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTVRLWDVL
NGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDLGHGLMIGELKGHTDTIYAL
KFSRDGEILASGSMDNTVRLWDAMKAFDDVETDDFTAATGHIHLPDNSQELLLGTYHSKS
TPVTHLHFTRRNLLLAAGGYNSQ
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggcggctttgcaagatggaccgatggagctggacgcagagaaagagacaaagcctgaa
atacttagcgatgggacgtcaaacctctcggggaacactgggaacggggccctctcctca
tcacccctcaccgctgcccccgccggcggagccccgaagcaggaggaccaacaaactttg
atcgcagtgctccagtttctaaagcggaataaactgtcagagtcggtggagatcctgagg
cgagaagcgggtctcgcagaagaccaggtggactctctggcagccgatggcggtggagga
gggaaaggagacggagatggaggggatgcgaactctctgctcagccgggtgtccatcaca
gcagcagccgccccccagagcacgctgacccccgtgccagtcaagaaagaccatccagat
gtccgtgtggtgctgtcagcgtacagtcagcagggggatccatctctgtatcaggtgtac
tacagcgacctgaagaacttcatagagtcagtgctggactgccaccgagcagaactgtcc
cagctcttctaccccctgttcgttcacatgtacctggagctggtctacaacaacaatgag
accaaagccaaggctttcttcgacaagtttagcggtgatcaggagtgttactatctggat
gacctgcgtgttctttgcggcctcagtaagaaagagcacatgaaggggaacgaggctctt
ctggatttccgcaccagccgcttcgtgttgcgcatctccagagactcgtaccagcttctg
aagagacacttgcaggaaagacataataaccagatatggaacatcattcaagagcacttg
tacatcgacatctttgacggcatgccccgcagcaagggtcagatcgacagcatgtccggc
agccttgggggagaggccaaacgagaagtcaacaaagccaaggtgttctacgggctgctg
aaggagccagagattgaagtcccgctagatgatgaagatgatgaagcagagaatgaggaa
gggaagcccaagaagaagaaaactaaaaaggacagtataggctccaagagtaagaaacaa
gacccaaacgcccctcaacagaacaggatccctctgccagagctgaaggactcggacaaa
ctggataagatcatgtacatgaaggagagcaccaaaagaatccggctcagcccggagaac
ctgccttccatttgcttctatacgttcctcaacgcctaccagggtttgacggcggtagac
ttcactgacgactccagtctgttagcgggaggatttgcggactccacagtccgcgtgtgg
accgtcacacccaaaaaattacgcaaagtcaaatctgcagcagacctgaatctgattgat
aaagagtctgatgacgttctggagaggattatggatgagaagacggccagtgagtctaaa
atcctacacggtcacagcgggccggtgtatggcgtcagcttcagtccagacaggaactat
ctgttgtccagttctgaggacagtactgtcagactgtggagcctgcagacgtttacatgt
ctcgtggggtataaaggacacaactatccagtgtgggacactcagttctcacccttcggc
tattactttgtgtctggaggacacgacagagtggcacggctctgggcgacggatcattac
cagcccttgcgtatatttgccgggcatctggctgacgtcacctgcacgcggttccacccc
aactccaactatgtggccacaggctcgaccgaccgcactgtacgcctctgggatgtcctg
aatggaaactgtgtccgcatttttacaggtcacaagggacccatccattctctagcattc
tcacctaatggaaagttcctggcatctggatccacagatgggagagttttgctatgggat
cttggacatgggctgatgatcggagaactgaagggccacacagacacaatatatgccctc
aagttcagcagagatggagaaatcctcgcatcaggctctatggataacacagttcggctg
tgggacgccatgaaggctttcgatgacgtggagacggacgacttcactgcagcgacgggc
cacattcacctgcctgacaactcccaggagctgctgctggggacgtaccacagcaaatcc
actcccgtcacacacctgcacttcaccagacgcaacctgctactggctgcaggaggctac
aactcccagtga

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