Rhinichthys klamathensis goyatoka (western speckled dace): 130087321
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Entry
130087321 CDS
T09701
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130087321 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130087321 (spast)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
130087321 (spast)
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130087321 (spast)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
130087321 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_5
AAA_22
Vps4_C
AAA_14
AAA_16
Mg_chelatase
MIT
DUF815
AAA_2
NPHP3_N
IstB_IS21
AAA_24
nSTAND3
AAA_17
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
130087321
NCBI-ProteinID:
XP_056109558
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MNSGDRARQRGSARAGGRTCAQVSDGTSRSPLLDRLRSFIRTLARLPLSLLRALLLLLLC
LFRLRQTRRTMAAKDRGSDGCDETGELIRNYHKQAFEFISLALQIDEDDRGDKDKAVQWY
RKGIAELEKGICIQVTGAGEKANRARKLQDKMISNLSMAKDRLELLGKLVSKPPAEGFSD
HTSLSFSNGNLRPVAGGGAVSKKKDTLTISSQSHLRPKNPPKSAQNASGLHRTPSTSGRT
GPQNNQKGPSAKGGVRHNMKASNAATASPQRKRDMKNLKNVDSKLANLILNDIVDSGATV
QFNDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAKES
NATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASR
RLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLELLK
NLLSKHRNPLSQKELSQLARMTDGYSGSDLTSLAKDAALGPIRELRPEQVRNISPNEMRD
IRFPDFVDSLKRIKRSVGPQTLDQYVRWNREYGDTTAV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggggacagagcgagacaacgaggatcagcgcgtgcgggaggacgcacctgc
gcacaggtgtctgacggaaccagccggagtccgctactggaccggctgcgctccttcatc
cgaaccctcgcccggctcccgctgtccctgctccgggctctgctcctgcttctcctgtgc
ctgttccggctccggcagacccgacgaaccatggcggccaaagatcgcggctccgacgga
tgcgacgagaccggagagctgatacgaaactatcacaaacaagcgtttgagttcatttct
ttggctctgcagatcgacgaggatgacagaggtgataaagacaaggcggtgcagtggtac
aggaaaggcatcgctgaactggagaagggcatctgtatccaggtcactggagctggtgag
aaggcaaacagagccagaaagcttcaggacaaaatgatcagcaacctcagcatggccaaa
gaccggctggagcttctgggcaaactggtttcaaagcctccagcagagggcttctctgat
cacaccagcctttctttctccaatgggaacctgcgtccagttgcaggcggtggagcagtt
tccaaaaagaaggacactctcacaatctcaagtcaatcccatctgcggcccaaaaaccct
cccaaatctgcccagaatgcatctggcctgcaccgcacgccttcgaccagtggcaggacc
ggccctcagaacaaccagaaggggccctcggcaaaaggaggcgtcagacataacatgaaa
gccagcaacgctgccactgcgtcacctcagaggaaaagagacatgaagaacttaaaaaat
gtggacagcaaactggccaacctcatcctcaacgacattgtagacagcggggcaacggtg
cagtttaatgacatagcagggcaggatttggcgaagcaggcgctgcaggaaatcgttatc
ctccctgctcttcgtccagagctgtttactggtctcagggcccctgccagaggactcctg
ctcttcggcccccctggcaatgggaagaccatgctggcgaaagctgttgcgaaggaatct
aatgctacgtttttcaacatcagcgctgccagtctcacctccaaatatgtgggagagggt
gagaagctggttcgagctttgtttgcggttgctagggaactgcagccgtcaatcatcttc
atcgatgagatcgacagtctgctgtgcgagaggagagagggcgagcatgacgccagcagg
agactcaaaacagagtttctcatcgagtttgatggagtgcagtcaggaggagatgagcgt
gtgttagtaatgggagccactaacagacctcaggagcttgatgaggctgttcttaggcga
ttcgctaaacgcatttatgtggctttacctacagaggagactcgtttggagctgctcaag
aacctcctcagtaaacacagaaaccctttatctcagaaagagctgagtcagttagccagg
atgactgatggatactccggcagtgatctgacctcattggctaaagacgctgctctcggt
ccgatacgagaactgaggcctgaacaagtgaggaacatatcacccaatgagatgagggac
atccgttttccggacttcgtggattccctgaagaggataaagcggagcgtcggtcctcaa
acgctggatcagtacgtgcgctggaaccgagagtacggcgacacaacagctgtatga
DBGET
integrated database retrieval system
