KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130087325
Entry
130087325         CDS       T09701                                 
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
  KO
K04492  lymphoid enhancer-binding factor 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04310  Wnt signaling pathway
rkg04520  Adherens junction
rkg04916  Melanogenesis
rkg05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130087325 (lef1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    130087325 (lef1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    130087325 (lef1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130087325 (lef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rkg03000]
    130087325 (lef1)
Transcription factors [BR:rkg03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    130087325 (lef1)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 130087325
NCBI-ProteinID: XP_056109565
LinkDB
Position
Unknown
AA seq 382 aa
MPQLSGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAEINHSEEEGDLAEIKSSLVNETE
ISPNSNNHDAARQSQITPDSYHEKHRDHPDDGKLQDMYSKGHPYPSYPGYIMMTNMNNDS
YMNNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDINPKQAG
MPRHHPGPDIPNFYPLSPGGVGQMTPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHE
PHHDTDLMHMKSQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQI
LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKIQEPAPGGKR
TSFSSCKAKTAATGPLLEMEAC
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgccgcagttgtcaggtggaggaggcggcggggacccggagctctgcgccaccgatgaa
atgataccgttcaaagacgagggagacccgcacaaggagcagatcttcgcggagatcaac
cactccgaggaggagggagacttagcggagatcaagtcatctctggtcaacgagacagaa
atcagtcccaacagtaacaatcacgacgcagctagacagtcccaaataacaccagactct
taccatgagaagcacagggaccatccggacgatggaaagctccaggacatgtacagcaaa
ggccacccgtaccccagttacccaggatacatcatgatgaccaatatgaacaatgattcc
tacatgaacaacggttctctctcgcctcccattcccagaacgtcaaataaggtgccggtg
gttcagccgtcccatgccgttcaccccctcacccctctgatcacatacagtgacgagcac
ttcgcccccggcccacactcgggacaccacccacaggacatcaaccccaagcaagcaggt
atgcccaggcatcatcctggaccagacattcccaatttctaccctctctcccctggggga
gttggacagatgacccctccactgggatggttctctcatcacatggtaccaggccctcct
ggaccccatgccacgggaatcccccatcccgccattgtcaacccgcaggtgaaacacgaa
ccgcatcacgacacagacctgatgcacatgaaatctcagcatgagcagagaaaggagcag
gagcccaaaagacctcacatcaagaaacctctaaacgctttcatgctgtatatgaaagag
atgcgtgccaatgtggtggccgaatgcacgctgaaggagagcgccgcaatcaatcagatc
ctcggccggaggtggcatgctttatctcgggaagagcaagctaagtattacgaattagcc
cgcaaggaacggcagctccatatgcagctttacccaggatggtctgccagagacaattat
ggaaagaaaaagaagcggaagcgggaaaagatccaggaacctgccccaggaggaaaacgg
acttctttttcctcttgcaaagcaaagacagcagctacaggcccccttttagagatggaa
gcctgctag

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