Rhinichthys klamathensis goyatoka (western speckled dace): 130087433
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Entry
130087433 CDS
T09701
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130087433 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130087433 (lrrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_EndoS
LRR_1
ig
Ig_2
V-set
LRR_Zer-1
fn3
Sp38
Pur_ac_phosph_N
LRRNT
LSR
Ig_C17orf99
Ig_6
Ig_5
LRRCT
Fn3_ELFN
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
130087433
NCBI-ProteinID:
XP_056109699
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MARGTFFFVVQGQICFFLFLALLGLSSVQSTECPQLCVCEIRPWFTPQSTYREATTVDCN
DLHLTRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLTNMS
QLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRL
KAIDSRWFESTPNLEILMIGENPVVGILNLNFRPLTNLRSLVLAGMELTDIPGNAFVGLD
NLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMGE
LVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPSLESLMLNNNALNSLYQATAES
LPNLREISIHSNPLRCDCVIQWMSSNKTTIRFMEPLSMFCTMPLEVRGQRVRDILSLETS
GQCLPMISHDTFPNHLNLDIGMTVDLDCRAMAEPEPEIYWVTPSGNKVMIDTVSNKYQLS
STGTLRISHIQVDDSGHYTCVAQNTEGADTRVTAIRVNGTLLDSTQLMKIYVKQTESHSI
LVSWKVNSNVMTSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKHATFAVEISEQGTNTALAGVMGTILAIISLGSITVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKDKDGSSDTKPTQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccagagggacattcttttttgttgtgcagggccagatttgtttcttcctgtttttg
gctttacttggcctctcttcagttcagagtacagaatgtccgcagctttgtgtgtgtgag
atccggccttggttcacaccccagtccacctacagagaagcaactaccgttgattgcaat
gaccttcaccttacacgcatccctgggaacctgtccgctgacacacaggtgttgcttctg
caaagtaactacattgccagaactagtgaggaactggagcagttactgaatctcacagaa
ctcgacctgtcccagaacaacttcagcaacatccgtgatatcggcctgaccaacatgtca
caactcacgacgcttcacctggaggaaaaccaaatagtcgagatgcctgacttcagtttg
caagacctcaccaatctacaggagctgtacattaatcacaatcagatcagctccattgca
cccaatgcctttgccggattgcgtaaccttctgagactccatctgaactccaacagactc
aaggccattgacagtcgttggtttgaatcaacccccaacctggagatcctgatgattggg
gaaaatcctgttgtcggcatcctgaatttgaacttcagacctcttaccaacttgagaagc
ctggtcctggcaggaatggagctcactgatataccaggcaatgcgtttgttggactagac
aacctggagagtctctccttctatgacaataaactagttcgggtgccacagactgctctc
cagaagcttccaaacctgaagttcctggatttgaacaagaacccagtacataaaattcaa
gagggggactttaaaaacatgctaaggctgaaagaacttggcattaacaacatgggagaa
cttgtgtctattgatcgctttgccctggataacctcccagagttgaccaaactcgaagcc
accaacaaccccaagttttcctatgtgagccgcttagcgttccgtgacttgccttcacta
gagagtctaatgctcaataacaatgctctaaactccctctaccaggctacggcagagtcc
ctgcccaacctgagggagatcagtatccacagcaacccgctacgctgcgactgtgtaatt
cagtggatgagctcaaacaagacaaccattcgatttatggagcctctttccatgttttgc
acaatgccacttgaggttagaggtcagcgtgtgagagacatactttctcttgaaacttca
ggccagtgtctgcccatgatttctcatgacacgttccccaatcacctcaacctagacatc
gggatgacggtagaccttgattgtcgtgccatggctgaacctgaaccggaaatatactgg
gtgaccccgtctggtaacaaagtcatgatagatacagtgtccaataaataccaactcagc
agcacaggaactctgcgcatatcacatattcaggtggacgactctggccactacacctgt
gtggcccaaaatacagaaggagcagacactcgggtgactgccattcgagtcaatggaact
ctcctggatagcacccagcttatgaagatctacgtgaaacaaaccgagtcccactcaatt
ttagtgtcctggaaagtgaactccaatgtcatgacgtccaatctaaagtggtcgtctgcc
accatgaaaatcgacaaccctcacatcacctatacagctaaagttcctgtagatgttcat
gagtacaacctcacacaccttcagcctgctactgagtatgaggtctgtctctcggtctcc
aatatccaccagcagacccaaaagtcatgcgtcaacgtcacaaccaagcacgccacattt
gctgtggaaatctcagagcaaggcaccaatacggctctggcaggggtcatgggcacaata
ctggccatcatcagcctaggctccatcacggtgtacattgcaaagagatggaagaggaag
aactaccatcactccttaaagaagtacatgcagaaaacctcctccatccccctaaacgaa
ctgtatcctcccctcattaacttatgggaggcagacagtgaaaaggacaaggacggttct
tcagacactaagccgacacaggtggacacaacaagaagttattacatgtggtga
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