KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130087462
Entry
130087462         CDS       T09701                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130087462 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rkg03019]
    130087462 (wdr82)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130087462 (wdr82)
Messenger RNA biogenesis [BR:rkg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     130087462 (wdr82)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     130087462 (wdr82)
    COMPASS/SET1 complex (yeast)
     130087462 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_NWD2_C Beta-prop_HPS5 PQQ_2 MinC_C
Other DBs
NCBI-GeneID: 130087462
NCBI-ProteinID: XP_056109735
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGVVLHSFGGYNNSKG
VILEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaactcacagacaatgtgctgcggagttttagggttgcgaaggtgttccgagagaat
tcggacaaaatcaactgttttgacttcagttcaaacggcgaaacagtaatatcgagtagc
gatgatgactctattgttctatacgactgccaggagggaaaacccaaacggacgctttac
agtaagaagtatggtgtggatctcatcagatacacccatgccgccaacactgtcgtctat
agctctaacaagattgatgatactatacgatacttgtctctacatgacaataagtacatt
cgctactttcctggacacaataagagggttgttgctctgtctatgtctcctgttgatgac
acattcatttctggctcacttgataaaactattcgcctgtgggaccttcgctcacctaac
tgtcaggggctcatgcacctgcaagggaaacctgtgtgttcttttgatcctgaggggttg
atttttgctgcgggagtgaactcagagatggtcaaactttacgatctacggtcctttgat
aagggcccattcgccacatttaaactacaatatgagcgaacatgcgagtggacgggcctc
aagttcagcaatgacggaaagctcattctggtctccaccaatggaggaacgctcagagtg
ctggatgctttcaaaggagttgtgctccactcgtttgggggctataacaacagtaaaggt
gtcattctagaggcttctttcacaccagactcacagtttgtcatgatcggatcagaggat
gggaagatccatgtgtggaatgctgagagcgggatgaaagtagcacttcttgatgggaag
cacactggtccggtcacctgtctgcagtttaaccccaaattcatgacctttgccagtgcc
tgctctaacatggcgttctggttacccacgattgatgactga

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