Rhinichthys klamathensis goyatoka (western speckled dace): 130087508
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Entry
130087508 CDS
T09701
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130087508 (ccdc174)
03041 Spliceosome [BR:
rkg03041
]
130087508 (ccdc174)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130087508 (ccdc174)
Spliceosome [BR:
rkg03041
]
Complex C
Other components
EJC/TREX
130087508 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
130087508
NCBI-ProteinID:
XP_056109811
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MDKKKKPYNVTASSLVDLKAELYRKQEKFKHDRLGQDAGAAQKSKTKIKKPNIWTKQNEG
VNVRAERDVQQTVEEENTLDKSRQKLEEKARLYEQMTKGDFPDEETESLFLVDFTQKIIN
QRNEPQTCTPGDRDGEDSDVNVPVPDPQNANEEWVDYVDALGRSRRCLRKDLPGFQKMDQ
DLQNKRVTGADRTLLSDDMRREMQREQWEKEEEEQMKRPVGPIHYENIREQEARELGVGY
FAFAQDEDRRRKQRETLDMLRDQTTEQRGKREQLKDKRKSLLEARLAKVRMRRIKKSKLE
PGDEEDAPAADGAENDEEVGPPAPATVPKVEVEIQERKDTKPGVPYVREWDRGKEFSWGQ
WTSLRREERDSDFAPPSAYFADDRWANHNRATDKGQAKGKPAFKWSESQRATERDTENIS
TPSHPSDIPTYAQPSQPQTAQTQSLDDLLSYYKHST
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaccatacaatgttacagcgtcatcgctggttgatttgaaagcg
gaattatatcggaagcaggagaaatttaagcacgacagacttggccaagatgcaggagca
gcacagaagtccaagacaaaaataaaaaagcccaatatctggactaaacaaaatgaagga
gtcaatgtacgagcggagagggacgttcagcaaactgttgaggaagaaaacacactggac
aaatccaggcaaaaattggaggaaaaggctcgtctttatgaacagatgacaaaaggagat
ttcccagatgaggagactgaaagtctttttctggtggacttcacccagaagatcatcaac
cagaggaatgaaccacagacatgcactccaggggaccgagatggagaggactctgatgtg
aacgtccctgttccagacccacagaatgcaaatgaagaatgggtggactatgttgatgca
ttgggacgttctcgaagatgtttgaggaaagacttacctggttttcagaaaatggaccaa
gatctccagaacaagagggtgactggcgctgacaggacgctgttatctgatgacatgagg
agagaaatgcagagagagcagtgggagaaagaggaagaggagcagatgaagagacctgtt
ggacccattcactatgaaaatatcagagagcaagaggccagagagctgggtgttgggtat
tttgcttttgcccaggatgaggaccgacgtagaaaacagagagaaactttagacatgctg
agagatcagaccacagaacagcgcggcaaacgcgaacaactgaaggataagcggaaatcc
cttcttgaagctcgactcgctaaagtgaggatgagaaggataaagaagagcaagctggag
ccaggggatgaagaagatgctcctgccgctgatggtgctgagaatgatgaagaagttgga
cctccagcccctgcaacagtgccgaaagtggaggtggagattcaggaaagaaaagacacc
aaacctggcgttccatacgtaagagagtgggacagaggcaaagagttctcctggggtcag
tggaccagtcttcgtcgagaggagcgagactccgattttgctcctccctctgcttatttc
gcagatgacagatgggccaatcacaacagagcaacagacaaagggcaggctaaaggaaaa
cctgccttcaagtggtctgaatcccaaagggccaccgaaagagacacagagaacatatct
acccctagtcatccttctgacatccccacatatgcacaaccttctcaaccacagactgct
caaacacagagtctggatgacctgttgtcgtactacaaacactccacgtga
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