Rhinichthys klamathensis goyatoka (western speckled dace): 130087592
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Entry
130087592 CDS
T09701
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00260
Glycine, serine and threonine metabolism
rkg00270
Cysteine and methionine metabolism
rkg00450
Selenocompound metabolism
rkg00670
One carbon pool by folate
rkg01100
Metabolic pathways
rkg01230
Biosynthesis of amino acids
Module
rkg_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130087592 (cth)
00270 Cysteine and methionine metabolism
130087592 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130087592 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130087592 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130087592 (cth)
Enzymes [BR:
rkg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
130087592 (cth)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130087592 (cth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
DUF5959
Motif
Other DBs
NCBI-GeneID:
130087592
NCBI-ProteinID:
XP_056109964
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MASHMQNDSSSASAGFQPVFKSFATDAIHVGSEPEQWNSMAVVPPISLSTTFKQHGPGKH
AGFEYSRSGNPTRNCLEKAVAALDGAQYCLALASGLAATLTITHLFKAGDGILCMNDVYG
GTNRYFRKIAAEVGLDVSFADLTKLEELKAALKPNTKMVWIETPTNPTMKVVDIQGCSDI
VHEHNKDTIVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLMSLSREDLYE
RLKFLQNALGAVPSPFDCYMCNRGLKTLHLRMKQHFKNGLAAAQFLEADPRVDRVIFPGL
PSHPQHELTKRQCTGCPGMITFYIKGKLEHASTFLSNLKLFALAESLGGYESLAEHPAIM
THASVPENERKKLGISDTLIRLSVGLEDEEDIIADLDQALGAAHPKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacacatgcagaacgacagcagctcagcctcagccggcttccagccggtcttt
aaatcgttcgccacagatgcgatccacgttggttcagagccggagcagtggaactctatg
gccgtagtgcctcccatttcactgtctaccacctttaaacagcacggtccggggaaacat
gcgggttttgagtacagcaggagtggaaatcccacaagaaactgtcttgagaaagcagtt
gctgctttggatggtgcacaatactgtctcgctcttgcctctggattggctgcaactttg
accattacacatctttttaaggccggagatggaattctgtgcatgaatgatgtttatgga
ggaactaaccgatatttcaggaaaattgctgcagaagttggccttgatgtctcatttgct
gacctcacgaagctagaggagctaaaagcagctttaaaaccgaatacaaagatggtgtgg
attgaaacgcccacaaaccctactatgaaggtcgtggacattcagggctgttcagatatt
gtccatgagcacaacaaggacacaattgttgttgtggacaacactttcatgtcagcctac
tttcagcgccctcttgcacttggagcagacatctgcatgtactctgcaacaaaatacatg
aatggacacagcgatgttgtcatggggttgatgtctctcagccgtgaggacctctatgaa
cgcctgaagtttttgcaaaatgcacttggggccgttccctctccatttgactgttatatg
tgcaaccggggtctgaagacactgcacctgagaatgaagcagcactttaagaacggactg
gcagcggcacagtttctagaggccgacccaagagtggacagagtcatcttcccaggtctt
ccatctcaccctcagcacgagctgacaaagagacagtgcacaggctgtcctgggatgatc
actttctacattaaaggaaaactggagcacgcctcaactttcctcagcaatctgaagttg
tttgcgcttgctgaaagtcttggtggttatgagagtctagcagagcacccagcgattatg
actcatgcttcagttcctgagaatgagaggaaaaagctgggaatcagtgatacactcatt
cgtctgtcggtgggcctggaggatgaggaagatattattgcagacctagaccaagccctc
ggtgctgcacatccaaaaaagtaa
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