Rhinichthys klamathensis goyatoka (western speckled dace): 130087641
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Entry
130087641 CDS
T09701
Symbol
cul1b
Name
(RefSeq) cullin-1b
KO
K03347
cullin 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04114
Oocyte meiosis
rkg04120
Ubiquitin mediated proteolysis
rkg04141
Protein processing in endoplasmic reticulum
rkg04310
Wnt signaling pathway
rkg04340
Hedgehog signaling pathway
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130087641 (cul1b)
04120 Ubiquitin mediated proteolysis
130087641 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130087641 (cul1b)
04350 TGF-beta signaling pathway
130087641 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130087641 (cul1b)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
130087641 (cul1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
130087641
NCBI-ProteinID:
XP_056110024
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MSSNRGQNTHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGIPPSKPSKKTPTPGGAQFVGLELYKRLKEFLRSYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERHGETINTRLISGVVQSYVELGLNEDDAFVKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSA
LNDPKIYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQFNTENSYTVQQLADSTQIKTDILIQVLQILLKSKLLVLEDENANID
EMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKLLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacaggggccagaacacccacgggctcaaacagattgggctggaccagatc
tgggatgacctgagagcaggaatacagcaggtctatacacgccagagcatggctaagtca
cgctacatggaactctatacacatgtgtataactactgtaccagcgtgcaccagtccaac
caggccaggggtgctggcatccccccctccaaaccctccaagaaaactcccacacctggt
ggggctcagtttgtcggactagaactctacaaaagactgaaagagtttctgaggagctac
ctgacaaaccttctcaaggatggagaggacctgatggatgagagcgttctgaagttctac
acacagcagtgggaggactatcgcttctccagtaaagtattaaacgggatctgtgcttac
ctcaacagacactgggtgcgccgagagtgtgatgagggacggaaaggaatttatgaaatc
tactctcttgctttggtcacctggagagagtgtttatttagacctcttaacaagcaggtg
acaaacgctgtgttaaaactcattgagaaggagagacatggtgagactattaacaccaga
ctcatcagtggagtggtgcagtcctatgtcgagttgggcttgaatgaggatgatgcattt
gtgaaggggccgacattatcagtttacaaggagtactttgaaacacagtttttggcagac
accgaacgcttctatacacgggaaagcacagagttcctccagcaaaaccctgttactgaa
tacatgaaaaaggcagaggcacggttactggaggagcagcggcgggtacaggtgtatctc
cacgaaagcacacaagacgagctggctcgcaagtgtgagcaggttctcattgagaaacac
ctggagatctttcacacggagttccagaaccttctagatgcagataagaatgaagatctc
ggtcggatgtacaaccttgtttcccggatcacagacggattgggcgagctcaagaaactc
ttggagtcccacattcataatcaaggactggcagccatcgagaaatgtggagattcagca
ctcaatgatcctaaaatctacgtgcaaacgatcttggatgttcacaagaaatacaatgcc
ctcgtcatgtctgcgttcaataatgatgctgggtttgtggcggcactcgataaggcctgc
ggaagatttattaataataatgcggtaacaaagatggcacagtcctccagcaaatcccct
gagcttctggccagatactgtgactccttactgaagaagagttcaaagaatccagaggag
gctgagctagaagatactctcaaccaagtgatggtggttttcaagtatattgaggataaa
gacgtgttccagaagttctatgccaagatgctggccaaaagactggtgcaccagaacagt
gccagcgacgacgccgaggccagtatgatctccaaactgaagcaagcatgtggtttcgag
tacacctccaaactccagcgcatgttccaggacatcggtgtcagcaaagacttgaatgag
caattcaaaaagcacctttccaactcggagcctttggacttggatttcagtatccaggtt
ctgagctctggctcatggccgttccagcagtcttgcacattcgctttaccatccgagttg
gagcggagttaccaaagatttacagctttttatggaagcagacacagcggccggaagttg
acgtggctttaccatctatccaaaggagagctggtcaccaactgcttcaagaacagatac
actctgcaggcctccaccttccagatggccatcctgctccagttcaacacagagaacagc
tacaccgtccagcaactggctgacagcacacagatcaaaacagatattttgattcaggtc
ttacaaatcctcttgaaatcaaagttgctggtcttggaggatgagaatgcaaacattgat
gaaatggatttcaagcctgatacattaatcaaacttttcttgggctataagaataaaaag
ttacgggtgaacatcaatgtgccaatgaagacagagcagaaacaagagcaggagacgaca
cataagaacattgaggaagacaggaagctcctcatacaggcagctatcgtgagaatcatg
aagatgaggaaactgttaaagcaccagcagcttttggcagaagtgctgaaccaactttcc
tcacgattcaaacctcgtgttcctgtcatcaagaaatgcattgacattttgatagagaag
gaatacctggaacgtgtggatggggaaaaagacacttacagttacttggcataa
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