Rhinichthys klamathensis goyatoka (western speckled dace): 130087667
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Entry
130087667 CDS
T09701
Symbol
rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130087667 (rttn)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130087667 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
130087667
NCBI-ProteinID:
XP_056110071
LinkDB
All DBs
Position
Unknown
AA seq
2234 aa
AA seq
DB search
MELSSLIKKIGHSLVEIRVRALKNIRSKLDHDLIAVPDLVQEKMLFVFLLEWFNFPEVPM
QEEVLDLISMLSKHPTAAQMLREVGAVEFLTQLSPNVDLRLRTTVDGIFDQLFHLPEALP
GCPPTTSYEPHSVPALQTEEDSSARGYFQCSKPKQTDAPTPRVSFITSVRCLKFSVFPWL
SLNTTDRHILSSNESSLRSGNHNLVRTTCELLRDVIMQDFPAEIFLQRPSTVQSLLSLLG
LNVDGDVSYLTLQALACLEQLCRNLRSRLRFYRDPSFYSAKQDPVSQNSSISYPHEVRGT
QRSGVSSPEESSPRPSVVGRPVQRARGDGQDGDAASSSGSSSQIGAPPRPSHQSPLPQLP
PEMEAEDSLELQLQQWSLARFAVAAVEHALPLIRTESLKVFQRVLELLAEAQGLLGDSVA
PEVWDEHNPTATELREKLQACIETLGDIMCHHHGMTSSEEPESSVIHHRLVFTGTAIFTI
RLLQTLLPVEKAEDNLPESTVAAIFLLCLDASFCVAYPLIHESAVAYLEQACFERYSLYR
RVYRVSHCMEATCAFLKDAQAEGDKNWHELLELADQGIDAFPYHQHLPMVKECVQICSYL
WKFAQASPLLQSESQKIFLKLLSHPLSQVKVETYSCTLSVLKECLGVQNVARPASSICSG
VHFLLHSRVLYEISVFGLQDQAREVSAAAKDILLYLLKGRLMMTAASWSRFNEALYPVIP
ILQSYASTDDALGNCILLLSEASAEKEDEVCSPPTRLRMALRLLFTKHHTVRNKAVQHLL
PHLTSSEGASNSRPTLDSSTLSCLPNLYVLNKSVDIKLSNSEKSYVKVESVNKLYNILTS
DTVDLVLRKSAADQLAIVLQDSSMHVVLKALGLSDKLISFITECVNNNVAGMDCMLEPSI
CMLRKLVFADPSLRHSLAQQTSLLVTLLRASLLIKESQGDVSEAAALMCNLLFDEIARMD
VWTDKAGSDTGLSSFSLPAAIIRRYNLPFQAPSHHAVSPYCSVLPPYSDLLSLKPAWEAL
QITWNTAWHSGIDGLLEHLKGFRSDVLEFHGDLVLSESQVVVLRISNIRSGLGDCIHGVR
DASSHSTVTFALTRMHLYLFADRLALKSTAQSSKNILQTLSWHNAVERFIMVRPACRQDE
RLLVDIVSFLNTFFKQNQSELDHQDLKWLLELLLNQESHTLLNLLLSAELQTHTQIQSQG
EADKLQAHLSHRLQRELTGLFNTLLLRMTHSPDRVCGVLSGPFASELSLRLLQCLRVSDA
PCFYGLPSLERTLRTMAHVTALPGWSTHAPSMEPNTLCLKYLSGLLEVISSFYVDLGGNS
MSFMGKGVTKNAVICLLHLSHEMMKETKNEDWISLWSLGREQSSDEQSAAQLGLAWLIPL
WVDRDPEVRCASLAVGAALSSLERGCVALSESCQNISGGLWATVLNILLERQECSMVRRE
AAFILQNLLVMPMPANAEEAKECAWQSPCVHDEDSGLCLVGLPALQALLYHCQFFESVGQ
MVKSCYMGRHAFTLSPSPPPANVTQETDLNDSLKHWREMLAPLNQTQGSGSMSTSSTLIP
SGSSSGTHSPVPTSGVAGIQDTPVNRLTAQGQSDTDSSDSALTQESHPGGRTEPVAIVTP
HLLLSVCGLLDNLLAVLPEFSLSALKHNHILQSMASVVDAATISQCVSELRTPLLPAAME
DARNQVLSSLYYVQSLCKLLQSAAMHSEDAPFHRELFKPLLNNLISILTLSVADLDAQAQ
GAVLNTWADVLMLLATLLRRNQAAVGPSVGVALGKHWQCFSDTIRVCLNQSGAESSLYTS
TLHFLCVLFTEEAKRRSGGHTEDLTSKGPSSSLTAVLSFEPGEVMCELLLEQYEKILFQD
PFKKVMAKTFMSLLACSSSAQSYACKAGVIDSCVERMKHIYAELHLESVKTGKSTHRRKV
ENSMRELKMILEILRNCLYQHNECKTVATELRLAAVLLALWPWFLLDDLTMTSALELLCV
YTANCTAACSALCSSSSCSSGSVQAVLPKTAVTNSLMHGVMKLASQVAPDNSSIHSLAFS
LLANLAISRDCKGALLKSNFLQNFLSLPMPKAGGRGGVSTGDPLSLWLRLLLNVSFGEDG
QQMILRLRGALELLVELAQSKHSSTKPTILLILHNICFCSANKPKVLANDKAVELLVSCL
SSSSSDIRTIGASALWALLHNNQKAKATLKCPSIRLKVEEAYVSARKEEEHRSDKPLNIY
LLKCLKNLTHIFNS
NT seq
6705 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcatcactcataaagaaaatcggacactccttagtggaaatcagagttcgg
gctcttaaaaatatcagaagtaaactggatcatgatctcatcgctgttcctgatctggtc
caggaaaagatgctgtttgttttccttctggaatggtttaattttccagaagttccaatg
caggaagaagttctggacttgatcagcatgctgtccaagcacccgaccgcagcccaaatg
ctacgagaggtaggggctgtcgaattcctaacacagctctcgcctaatgtggatcttcgc
ctccgaacaaccgtagacggcatcttcgatcagctcttccacctcccagaggccttgcct
ggttgtccacccaccacctcctacgagccacactctgttcccgcactgcagacagaagag
gactcgtcggctaggggatatttccagtgcagtaaacccaagcagacagatgctcccacc
cccagagtatcattcattacttctgttagatgcttgaagttctctgtttttccatggctg
tctttgaacacaacagatcgacatatcttgtcatcaaatgaaagttcccttagaagcggc
aaccacaacttggtacgaaccacatgtgagttgcttcgggacgtcatcatgcaagacttc
cccgctgaaatattcctgcaaaggccaagtacagttcaaagtctgctgtcacttctcggc
ctgaatgttgatggtgatgtcagttacctgacgttgcaggcattggcctgtctggaacag
ctttgtaggaacttgaggagtcgcctacgtttctacagagatccaagcttttactcagcc
aagcaagaccctgtttctcagaactcctctatctcctaccctcatgaggtgaggggtacc
caacggtctggggtttcttctccagaggaaagttcccccagaccctctgtggtgggccga
cccgttcagcgggcacgcggggatggccaggacggagatgctgcctcttctagcggtagc
agcagtcagataggggctccccccaggccttcccaccagtctccgctcccgcagctcccc
ccggagatggaagcggaggactcgctggagctgcagctgcagcagtggagcctggctaga
ttcgccgtggcggccgtggagcacgcgctccctctcatcaggacagagagcctgaaggtt
ttccaacgggtactagagctgctggcagaggcgcagggcctgctgggagacagcgtagcc
cccgaggtgtgggacgagcacaacccgactgcgacagagctgagggagaaattacaggca
tgcatagagacgttgggagacattatgtgccaccaccatggcatgacttcctctgaagag
ccagaatcatctgtgatccaccaccgactggtcttcacgggcactgccattttcacaata
cgtctcctgcaaaccttgttacctgtggagaaggctgaagataaccttccggaaagtaca
gtggctgccattttcctcttgtgtcttgacgcatccttctgtgtggcgtaccccctcatc
catgagtcagctgtggcgtacctagagcaggcttgctttgaaagatacagtctgtatcgt
agagtataccgtgtttctcactgcatggaggctacatgcgcctttttaaaggatgcacag
gctgagggcgataagaattggcatgagcttttggagcttgctgaccaaggaatagatgct
tttccgtaccatcagcacctaccgatggtgaaggaatgcgtccaaatttgctcctacctg
tggaaatttgcacaagcaagcccgctcctgcagtcggagagtcagaagatatttctgaag
cttttgtctcaccctctgtcccaagtgaaggtggaaacctactcctgcactctgagtgtt
ttgaaggagtgcttgggagttcagaatgtggccagaccggcctcatccatctgcagcgga
gtgcatttcttgcttcactcccgtgtcctgtatgagatcagtgtgtttggccttcaagac
caagcaagagaggtgagcgctgctgccaaggatatactactctatctgctgaagggacga
ttgatgatgacagccgcaagttggagcagatttaatgaggcactttacccggtcattcct
atattacagagttacgccagtactgatgacgccctgggaaactgtatcttgctgttaagt
gaagcatctgctgagaaggaagatgaggtttgttcaccgcctaccagactacggatggcc
ctccggcttctgttcaccaagcatcacaccgtgaggaataaagcagtccaacatctgcta
ccacacctgaccagctctgagggagccagcaactccagaccaaccctggacagctccaca
ttgtcatgtttaccaaatctctatgttcttaataaaagtgtggacataaagttgagcaat
tcagaaaagtcatacgtgaaggtggagtctgtaaataaattgtacaatatccttacgtcg
gacacggtagatctagttttgcggaaatctgcggctgatcagttggctattgttctgcaa
gattcatcaatgcatgtggtactgaaggccttgggcttatcagacaagctcatatctttc
atcacggagtgcgtcaacaacaatgtggcgggcatggattgcatgttggagcccagcata
tgcatgctaaggaagctggtgtttgcggacccctctctgcgtcacagtctggctcagcag
acgtctcttctcgtcacgctgctcagagcatctctgttgataaaggagagtcagggtgat
gtgagcgaggctgccgcattgatgtgcaatctgctgtttgatgaaatcgcacgaatggac
gtttggactgacaaagctggctcagacacaggcctgtcttccttctcactgcctgctgcc
attatacggaggtataatcttccgtttcaagcgccctcacaccatgcagtgagtccctac
tgttcagttctccctccatattcagacctgctgagtctgaaacctgcctgggaggcactg
cagatcacctggaacacagcatggcattctgggattgatggactgctagagcatctgaag
ggttttaggagtgatgtactggagtttcatggtgatctggtgctgtccgaatctcaggtg
gtggtgttaagaataagcaatataaggtccgggttaggggactgcattcacggggtccgt
gatgcaagctcccacagcacagtcacctttgccttgaccagaatgcacctgtaccttttc
gctgaccgccttgcactcaaatccactgcccagagcagcaagaacatcctgcaaacccta
agctggcacaacgctgtagagagatttattatggtacgtccagcttgccgtcaagatgag
aggctcttggtggacattgtctcattcctcaacaccttctttaagcagaatcagtctgag
ttggatcaccaggacctaaaatggctcctagaattactcctaaaccaggagtcacacacc
ctgctgaacttgttgctgagtgctgaactgcagacccacacacagatccagtcacagggg
gaagcggacaagcttcaggcccacctcagtcaccggctacagagagaactgacaggcctc
ttcaacactctgctgcttcgaatgacacacagtcctgacagggtgtgtggggttctgtcc
ggaccgtttgcttctgagctgtctctgcgcctgctacagtgcctgcgcgtgtccgacgct
ccatgcttctacggcctgccctctcttgagcgcacgctcaggaccatggcccatgtgacc
gccctgcccggctggagcacacacgcacccagcatggagccaaacacactctgcctcaaa
tacctcagtggcctcttggaagtcatctcttcattctacgtagatttgggaggaaattca
atgtccttcatgggcaaaggagtgacaaaaaatgctgttatctgcctgcttcacctgtca
catgagatgatgaaagaaaccaaaaacgaggactggatatccttgtggtctttgggacgt
gagcaaagttctgatgagcagagtgctgcccagcttggcttggcctggttaattcccctg
tgggtggaccgagaccctgaggtgcgctgtgccagcctggctgtgggtgcggctctgagt
tcgctagagagagggtgtgtggcgctgtcagagagttgccagaacatttcaggcggcctg
tgggccacggtactcaacatcctgctggagagacaggagtgcagtatggtgcgccgagag
gcagcgtttattttgcaaaacctccttgtgatgccaatgcctgctaatgcagaagaggcc
aaagagtgtgcctggcagagcccctgcgtgcatgatgaggattcaggactgtgtctggtc
gggcttcctgccctgcaggctctgttgtaccactgccagttttttgaaagcgtgggccag
atggtgaagagctgttacatgggcagacatgccttcaccctcagcccctctcctccgcca
gccaatgtcacccaggagacagatctgaatgattctctaaagcactggagagagatgctt
gctcctctaaaccaaactcaaggctcaggatccatgtccacctccagtactctgattcca
tcaggaagctctagtgggacacattctccagttccaacctcaggtgttgctggaatccag
gacactccagttaacagactcactgctcagggtcagagtgacacggacagctcagactcc
gccctcactcaagagtcccacccagggggaaggactgagcctgttgctatagtaacccct
cacctgttgctatccgtgtgcggtctactggacaacctgctggctgtgcttcctgagttt
agtctctctgccctcaagcacaaccacatacttcagagcatggccagtgtggtggatgcg
gcgaccatatctcaatgtgtcagtgagttaaggacacctcttctgccagctgctatggaa
gatgctaggaaccaggtgctgagtagcttgtattatgtgcaaagtttgtgtaagctcctg
cagtcagcagcaatgcacagtgaggatgcgccgttccaccgagagctcttcaaacccctg
ctgaacaacctaatttccatcctcacgctgtctgtcgctgacttggatgcgcaggcccag
ggtgcagtgctcaacacctgggcggatgtgttgatgctcctggctactctgctgcgcagg
aaccaagctgcggtcggcccatctgtcggtgtggcactggggaaacactggcagtgcttt
tcagataccatccgagtgtgtttgaaccaatcgggcgcagagtcttctctctacacgtcg
accctgcactttctgtgtgtgttgttcacagaggaggctaagaggagatcgggaggccac
actgaggatctgaccagcaagggcccaagctcctcactaacagcggtcctgtcttttgag
cctggagaggtcatgtgtgaactattattagagcaatatgagaagattctgttccaggat
cccttcaaaaaggtgatggccaaaacgttcatgtctctgttagcctgtagctccagtgct
cagagttacgcatgtaaagctggcgtgattgacagctgtgtggaacgcatgaagcacatt
tacgcagagcttcacctggagtctgtgaaaacgggcaagagcactcacaggaggaaggtg
gagaacagcatgagagaacttaagatgattctagagattctgcgaaattgcctgtatcaa
cataatgaatgcaaaactgtggctacagagctgcgtctggcagcggtgctgttggccctg
tggccctggttcctgctggacgacctcaccatgacttcagccctggaactgctctgtgtc
tacactgctaactgcacagctgcatgcagtgctttatgtagcagcagcagttgtagctct
ggctcagttcaggctgttcttcctaagactgcggtcacaaattcactgatgcatggggtg
atgaaactggcctcccaggttgcccctgacaacagcagcatccacagtctggctttctca
ttgctggccaacctggccatctcgagggactgcaaaggggcactgctgaagagtaacttc
ctgcagaacttcctgtctctccccatgcctaaggcaggtggtcgaggtggcgtttcgaca
ggggatcctctgtccctgtggctcaggctgctgctgaacgtgtcgttcggggaggacgga
cagcagatgatcctcaggctccgaggggctttggagctgctggtcgaactggcccagtcc
aaacactcgagcactaaacccaccatcctgctcattctccacaacatctgcttctgctcc
gctaacaagcccaaagtcttagccaacgataaagctgttgagctattagtctcttgtttg
agtagtagctcatcagatatacgtaccataggagcttcagcactttgggctttattgcac
aacaatcagaaggcaaaggccactttgaagtgtccttccatcagactgaaagttgaagag
gcgtacgtgtccgccaggaaagaagaagagcacagaagtgacaaacccctgaacatctat
cttctgaagtgcctgaaaaatctcacacacatcttcaactcttaa
DBGET
integrated database retrieval system
