Rhinichthys klamathensis goyatoka (western speckled dace): 130087692
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Entry
130087692 CDS
T09701
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130087692 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130087692 (stau2)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130087692 (stau2)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130087692 (stau2)
mRNA cycle factors
Stress granule specific factors
130087692 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
130087692
NCBI-ProteinID:
XP_056110117
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVVPAVAMPSPGALGLQPTINGTVPATTPTCPSPASGFVDST
VPSSPTGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGN
QVWESEGSSIKKAQHSTATMALTESSLPRPPPRSPKADSNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMFNQRYHYPVPKVFYVQLTVGSNEFIGEGRTRQAAR
HNAAMKALQALKNEPIPERPTQCSEEKKETEENSDASKSEISLVYEIALKRNLPVSFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQELKTLPVLPVVEKPKVHY
KKRPKTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVGT
EVTTGTGPNKKVAKRNAAEAMLLQLGYKASTPLQNTPEKMDNKGWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVPGSPGNYLTPKDIGQGSAGPFYTPSVGNTAAIARELLL
SGTSPTAEALVLKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTDKEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIEVENGSCDIQAKRLAERTDNK
PTNSGTTAQDSKDSKAVV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcagcccccttgtctggacctggcctgaccgccgtg
gtgcccgctgtggccatgcccagcccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcctctggctttgtggactccact
gtaccatccagcccaacaggccctcctcaagaaaacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacagaattcaacctcaatacaagctg
ctgaatgagaaagggcctgcacatgctaagatcttcacggtgcagctgtgcttggggaac
caggtttgggagtcagaaggcagcagcatcaaaaaggcccagcactccacagctaccatg
gccctgacagagagcagtctcccccgacctcctccccgctcccctaaagccgacagcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagctatctacagacccctggaccccaaacccattcccaactacagagccaattac
aactttagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggagcaacgagtttatcggagaggggcggacacgccaagctgcccga
cacaatgcggccatgaaagcccttcaggccctgaagaacgaacccattccagaaagacca
actcagtgttcagaggagaagaaagaaacggaggaaaacagcgatgcaagtaaatccgag
atcagtctggtctatgagatcgccctgaagaggaaccttcctgttagttttgaggtgctg
aaggagagtggacccccacacatgaagagtttcctcacacgtgtgacggtgggggagttc
tcggccgagggtgaggggaatagtaagaaactctccaaaaagagagcagccctttccatc
ttacaggaactgaagacactgccagtccttcctgtggtagagaaacccaaagtgcattac
aagaagcggcccaagaccatattaaagacaggaccagaatacggacagggcatgaaccct
attagcagactggctcagattcaacaggccaaaaaggagaaggagcccgaatatatgctg
ctttcagagagaggaatgccccgccgtagagaattcatcatgcaggtgaaagtaggtacc
gaggtcactacaggaactggacccaataagaaagtggccaagcgtaatgcagcggaggcc
atgcttcttcaactgggctacaaggcttctacaccattacagaacacaccggaaaagatg
gacaacaaaggctggaatggacaaagggctgcttttcctgaaacaacaaccaacacacaa
aaaggaattcttcacctctccccggatgtgtatcaagaaatggaagcaagcaggaataag
ggagtccctggttcccctggaaactatctgacacccaaagacattggccaaggttccgcg
gggccattctacaccccatcggtgggcaacaccgcagccattgcgagagagctgctgctg
agcgggacgtcacccaccgctgaggccctggtcctgaaggggaaagcacctgctttggcc
tgtggctccatccagccttcccagcagctggagtatttagcccatattcaaggcttccag
gtgcaatactcagatcggcaaactgacaaagagttcatgacctacctgaccctctcacct
gtgcagatgactttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggacccagtggatggaccaatcgag
gtggaaaatggatcatgtgacatccaagcgaaacgtctggccgagaggacagacaacaaa
ccgactaactcaggcaccactgctcaggacagcaaggattcaaaggccgtcgtctag
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