Rhinichthys klamathensis goyatoka (western speckled dace): 130087697
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Entry
130087697 CDS
T09701
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03030
DNA replication
rkg03410
Base excision repair
rkg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130087697 (fen1)
03410 Base excision repair
130087697 (fen1)
03450 Non-homologous end-joining
130087697 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130087697 (fen1)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130087697 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130087697 (fen1)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
130087697 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
130087697 (fen1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
130087697 (fen1)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130087697 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
BrxL_N
Motif
Other DBs
NCBI-GeneID:
130087697
NCBI-ProteinID:
XP_056110124
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADHAPSAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQSEDGET
TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQMKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKSGKVYATATEDM
DGLTFGTTVLLRHLTASEAKKLPVQEFHFSRILQDMGLTHQQFIDLCILLGCDYCGTIRG
IGPKRAIDLIKQHGSIEEILDNIDPNKHPAPEDWLYKEARGLFLEPEVVDGPSVDLKWNE
PDEEKLIQFMCAEKQFSEDRIRNGCKKIMKSRQVSTQGRLDTFFTVTGSISSKRKEPEKK
GSAKKKQKTSATSGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggtcttgcaaagcttattgcagatcacgcgccttcagccatcaaggag
caagacatcaaaaactactttggaaggaagattgctattgatgcgtccatgtgcatctac
cagtttttgatcgctgtcagacaggacggaaatgttttgcaaagtgaagatggagagacc
actagccacctcatgggcatgttctacaggaccatccgaatgctggagagcggcatcaag
ccggtttatgtgtttgatgggaagcccccacagatgaaatcaggagagctggagaagaga
ggcgagagacgagcggaggctgagaaacttctagctcaggcacaggaagcaggtgaacag
gagaacattgacaagttcagtaagcgactagtgaaagtcaccaaacaacacaacgatgaa
tgcaagaagttacttagtctaatgggagtcccatacattgaggctccatgtgaggctgag
gcgagctgtgctgctctggtgaaatcagggaaggtttatgccaccgcaacagaagatatg
gacggtttgacattcggaacaacagtcctgttgaggcatctaacagccagtgaagcaaaa
aagctccctgtccaagagtttcatttcagtcgtattctacaggatatgggtctgacacat
caacagttcattgacctgtgtatccttctgggctgtgactactgtggtactataagagga
atcggacccaagagggccatcgaccttattaaacagcacggctctattgaagagatcctt
gacaatattgacccaaataagcaccccgctccagaggactggctgtataaagaggctcgg
ggtctgttcttggaacctgaggtcgtggacggcccatctgtcgatctgaagtggaacgaa
cctgacgaggagaaactaattcagttcatgtgtgctgagaaacagttcagtgaggatcgt
atccgtaacggctgtaagaagatcatgaagagtagacaagtgagcacccagggccgtctg
gacacgttctttactgtaaccggatcaatctcttctaagcgtaaggagcctgaaaaaaaa
ggatccgccaagaagaaacagaaaacaagtgctacatcgggcaaatttaagaagggcaaa
tga
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integrated database retrieval system
