Rhinichthys klamathensis goyatoka (western speckled dace): 130087858
Help
Entry
130087858 CDS
T09701
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
KO
K06485
integrin alpha 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04382
Cornified envelope formation
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04518
Integrin signaling
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130087858 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
130087858 (itga6b)
04518 Integrin signaling
130087858 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130087858 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130087858 (itga6b)
04810 Regulation of actin cytoskeleton
130087858 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130087858 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130087858 (itga6b)
04515 Cell adhesion molecules [BR:
rkg04515
]
130087858 (itga6b)
04090 CD molecules [BR:
rkg04090
]
130087858 (itga6b)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130087858 (itga6b)
Exosomal proteins of breast milk
130087858 (itga6b)
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin alpha subunits
130087858 (itga6b)
CD molecules [BR:
rkg04090
]
Proteins
130087858 (itga6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
130087858
NCBI-ProteinID:
XP_056110348
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MGSYRTLTLPLLSFFGWTLISAFNLDTNNVIRKTGDANSLFGFSLAMHRQLRPSDKRMLL
VGAPRAKSLSKQTSTITGGMYNCDITSPSQSCQRVMFDNDENLNTENKQNQWMGVTLQSQ
GPGGKILVCAHRYQRRLFVNTNQELRDVTGRCYVLSQDLTINDASDEDGGDWMFCNGRNR
GHERFGSCQQGLSATFTKDYHYLVFGAPGAYNWKGVVRMEQKNSSLWDENIFDDGPYEVG
DESRLDPELVPVPANSYLGFSLDSGKMLTKRGQLTIVAGAPRANHSGAVVLLKKEEGKSS
LLTAEYILEGTGLASSFGYDLAVLDINGDGWQDIVVGAPQYFIKDGDIGGAIYVYLNKEG
AWDKITPKRIEGAANSMFGLAVESMGDVNLDGYHDVAVGAPYESNGAGNVYIFHGSTQGL
TKSQVLEGKDHNVKLFGYSLAGNMDMDRNSYPDLAIGSLSDSVLVYRARSVISIEKAVTT
TPKELDLTKKNCGDSICLDVTACFIFSANPKTYNPNLQVAYIIRVESERKKLNLPSRVIF
TQSSTNEYESKGVVELKGQGTQACVTRGLRLQETLKDKLRGIPIEVSVEIQKPPTRRKRQ
TALPNLLPILDSSQGASTVTNVQFIKEGCGADHVCQSDLQLQYTLHTREPNRDIFYPLPE
ENGVPILSLSDQKDIALEINVKNKGEDAYEAQLTASFPKSLSYSAVRTKSSDKPISCLAN
QNGSQADCELGNPFKRDAETTFYIILSTGGISLETTEIEIDLKLKTTSDQKQLQAVKAKA
IVKIQLLLSLTGVAKPSQVYFTGEVKGESAMKLATDVGSPIDYEFRVTNLGKPLKSFGTA
SMIIQWPKHNSQGKWLLYLMKITSTDLDSFSCSNQDEVNKLSLKEPSVSRTKREIGETPA
KEGTVSLFTDKRKYTVLSCEDGAECITFKCPLMGMDSNAVISLRAYLWNATFLEEYSKLN
YIDIIVKASLDFKTSATNIQLKNEPAQVRVTVFPERKVAQYGGMPWWVILVAILLGLLLL
GLLVFLLYKCGFFKRSKYDDSVPSYNAVRIKREERDYMPGKKEMDPPEKKQWMTSWNENE
SYS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttataggactttaaccttaccgcttctcagtttttttggatggacgctgatc
tctgccttcaacctggacacaaataatgttatcaggaaaacgggagatgccaacagcttg
tttggtttctccctggcaatgcaccgacaactcagaccatctgataaaagaatgttgctg
gttggtgccccaagagctaaatcattgtccaagcaaacgtccacaattacgggagggatg
tacaactgtgacataacttctcccagtcagtcatgccaacgagtaatgtttgacaatgac
gaaaacttgaataccgaaaataagcaaaaccagtggatgggagtgactctacagagccag
ggacctggaggaaagatattggtctgtgcgcatcgctaccagcggcgcttatttgtgaac
acaaatcaggagctacgtgacgtgacaggtcgttgctacgtattaagtcaggacctgacg
attaatgatgcctcagatgaagatggaggggactggatgttctgtaacgggagaaacaga
ggacacgagcggtttggttcatgccagcagggtctgtctgctacattcacaaaggactat
cactatctggtgtttggagcaccgggtgcttacaactggaaaggagtggtgcggatggaa
cagaagaacagctctctgtgggatgaaaatatttttgatgacggcccatatgaggttgga
gacgaaagccgacttgatccagaactggtgcctgtccctgccaacagttatttaggtttc
tctctggactctggaaaaatgctgaccaagaggggtcagttgactatagttgctggggct
ccaagagccaatcacagtggggcagttgtgctattaaagaaggaagaaggtaaatcatcc
ttgttgacggctgagtacatactagagggtaccggacttgcctcttcctttggttatgac
cttgcagtgcttgacatcaatggagatgggtggcaggacattgtagtcggagcacctcag
tactttattaaagatggtgatatcggtggggccatctatgtttaccttaataaggaaggg
gcttgggacaagatcacccccaagaggattgagggagccgccaattccatgttcggtttg
gctgtggaaagcatgggagatgtgaacctggatggttatcatgatgttgctgttggtgcc
ccatatgagagcaatggagctggaaacgtatatatattccatggttcaactcaaggccta
acaaaatcccaggttcttgaaggaaaagatcacaatgtgaaactctttggatactctctt
gctgggaatatggatatggacagaaattcttacccagatctggctattggatctctctct
gattcagtgcttgtgtacagggcacggtcagtgatcagcattgaaaaagctgtcaccacc
acaccaaaggagctagaccttactaagaaaaactgtggtgacagtatatgccttgacgtg
acagcctgtttcattttttctgccaaccccaaaacctacaaccctaacctgcaggtggca
tacattatcagggttgaatctgaaaggaagaaacttaatcttccttctagagtcatcttc
acccagagctcaaccaatgagtatgaaagcaaaggggtcgtggagctaaagggccagggc
acacaagcctgtgttacgagaggcctcaggctgcaggaaaccctaaaagacaaactgaga
ggcattcccattgaagtctctgtggagatccagaagccgcccactcgcaggaagagacag
actgctctccctaacctgcttcccatcctggactccagtcaaggagccagtactgtcacc
aatgttcaatttatcaaggaaggatgtggtgctgaccatgtatgtcagagtgacctgcaa
ctacagtatacattacacaccagggaaccaaacagggacatcttttatccattacctgaa
gaaaatggagttcccattctgtctcttagcgatcagaaggacatcgccctggagatcaac
gtgaaaaacaagggtgaagatgcttatgaagcgcagctgactgcctcgttccccaaatcc
ctctcttattctgccgttcgcactaaatctagtgataaaccgatcagctgtttagccaat
cagaacgggtctcaagctgattgtgaacttggaaatccgttcaaaagagatgctgagaca
actttttacataattttgagtacgggaggaatttctttggagaccactgaaattgaaatt
gaccttaaactcaaaacgacaagtgatcagaagcagttacaagcagtcaaagccaaagcc
attgttaagatccaactgctgttgtctctcacaggggtagctaagccatctcaggtctac
tttactggagaagtcaaaggagagagtgccatgaaactggcaactgatgttggcagtcca
attgactatgaattcagggttacaaacttgggcaaaccccttaagtcgttcggcacggca
tctatgattatccaatggcctaagcataactcccaaggcaagtggctgctgtacctcatg
aagataacctcaaccgatttagacagcttcagctgctccaatcaagatgaggtcaacaaa
ctcagtttgaaggagccttcagtgtcacgaactaaacgggaaattggggaaactccggca
aaagagggaacagtctccctttttactgacaagaggaaatacacagttttgtcctgtgag
gatggggcggagtgtataacattcaaatgtcctctaatgggaatggacagcaatgctgtc
attagcctgagagcttacctttggaacgctaccttcctggaggaatattcaaaattgaat
tacattgatattattgtcaaggcgtcactcgatttcaagacctctgctacaaatatacag
ctgaaaaatgagccagcccaggtacgcgttactgtgtttcccgaacgcaaagtagcacag
tatggtggtatgccctggtgggtcattctggtggccattttactaggactcctcttgttg
ggcctactggtctttctgctttataagtgtgggtttttcaaacgctccaagtatgatgac
agcgtccccagttataacgctgtgcggataaagagggaagagagggactatatgccgggg
aaaaaggaaatggatcctccggagaagaaacaatggatgacttcttggaatgagaatgag
agctactcatag
DBGET
integrated database retrieval system
