Rhinichthys klamathensis goyatoka (western speckled dace): 130087903
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Entry
130087903 CDS
T09701
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130087903 (irx1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130087903 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130087903
NCBI-ProteinID:
XP_056110421
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSFPQLGYPQFLNASQEVYGAERAGVMPSSPREGSSENGANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSPYELKDNHGAHPPGFAVHAAPGFYPYGQYQYGDPAR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRIFDSDNDDDADKNDDEEEIDLETIDIDKSEEPREDQNQETSDNQPER
ETVETPRILSSPALKMDSPLSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLAETA
TSPDNTQKLNVPSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMGVR
SLLSQNSNFPNHSPVTNPEKKPSSASGSPCLDSDNSSDSFSLKHNDQENVQRIESPTLAS
RSAFPVIHDRSHHETSQRALKTIS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagctgggttacccacagttcctaaacgcttcccaagaggtgtacgga
gctgagcgcgcgggtgtcatgccgtcctctccacgcgagggaagctcggagaacggcgca
aatcccgcgactgcagcggctgctatcacgccaatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactatagcgcctttttaccttacaacagtgccgagctggccctgctgtct
cagatggggtcgccgtatgagttgaaggataatcacggggctcacccaccaggatttgca
gtccacgcagcgcccggtttctacccatacggccagtaccagtacggtgacccggcccgg
gccaagagcgcaaccagagagaccaccagcacactgaaagcatggcttcaggaacataaa
aagaacccgtaccccaccaagggtgagaagatcatgctggccatcatcactaagatgacc
cttacgcaggtttccacctggtttgccaacgcgcgccggagactcaagaaagagaataaa
gtgacctggggtcgcagtgccgaggacagagacggacggattttcgacagcgacaatgac
gacgacgcggacaaaaatgacgacgaggaagaaatcgatctggagaccatcgatattgac
aagtcagaggagcccagggaagatcagaatcaggaaacctcggataatcagcctgagaga
gaaaccgtggaaacaccgcggatattatcctcaccagcacttaaaatggacagccctttg
tcgagtagtaataaagaacagagtgtggtcaaaagcgttggtgaggtgtctcctggtgga
ccagtgtgtcagaggcctggaaacagcaaacccaaaatctggtctttggcggagacggcg
acaagtcccgataacacgcagaaactcaatgtaccctcgacgcccgcaggcctcagggcc
tcaccctcgacccatccagctttcctctccactaacggaatttatacttgccagattggg
aaactacacaactgggcgagcgcagctttcctcagcgcaaattctctgatgggtgtgcgc
tcacttttaagtcaaaacagtaacttcccaaaccacagccccgttacgaaccccgagaag
aagccctcgtctgcctctgggtctccatgtctagacagcgacaactcatccgacagtttc
agtctcaaacataatgatcaagaaaacgttcagagaattgaatctccaacacttgcgtcc
agatcagcgtttccagtcatccatgacaggtctcatcatgaaacatcacaacgcgctctg
aagactatttcatga
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