Rhinichthys klamathensis goyatoka (western speckled dace): 130087910
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Entry
130087910 CDS
T09701
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130087910 (med1)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
130087910 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med1
SART-1
Motif
Other DBs
NCBI-GeneID:
130087910
NCBI-ProteinID:
XP_056110468
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
SLLRLHSLNNCLIFWSFCLHLLTESEKQSRLTALLERLHGKHNSTRSWQETSKVVRQAME
KRGVINTAGNPLLLNCLETLQRAQKVSSLPSMTDRLESIARQNMLGSHLSPSRTECYITS
DMFYVEVHLEKAGKLVDVKVAHHGENPVSCPELIQHLRDKNFDEFSKHLKGLVNLYKLPG
DNKLKTKMYLALQSLELDLTKMMHMFRIATNANTVETILHGSVGLLTARSGGHLVSLQCY
VSPNDIFEEGTGAQLSFTDVKIPRTLGVSVSVTVEGTTSVYKLPIAPLITGSHPVDNKGT
PSFSSVTNSNCVDLPACFFLKMNCLMPFSALYIKKMGSSTGIPVFETAPTLSPLYDLIIK
SQLHEDGGASPPALAQTMRFYASLPGQQHCYFLNGDAPVQDGRCLQGALVSKIPFRHPAQ
VPALLDIIRHQAAYNTLIGSCVKKTYIKEDTPGLLQFEVCPLTDSSFSVSFQHPVNESLV
CVVMEVIDSMQVACKLYKGLSDALICTDDFITKVVHRCMSIPVTMRAIRRKAETIQADTP
ALSLIAETVEIMVKKNLPPTGSPGYMGMGTGPDGSNPMGLPGLSSGTSTAGSNNVGGSSS
FQGPITSLFNMSRTGQGGSCMDTMVQVGGQQQATQQQQQSQSHGSDDFNKVTQNPILTSL
LQITGSVGSSPTPQPPQPHQTPPTTTSPASNTKNHPMLMNLLKDNPSQDFAALYSSSPLE
RQNSSGSPRTDSQGQSCPGTKGKKKRPRGSDKGVMGAGGGMSMKQQFQQQVGGMTQQHHH
THHSEDDFHRELFSMDVDASQNPIFDVSLPGDGLDTPHSITPAPSQCGTPPSGPGMPYHQ
HCHVQPQTQVQSQPHGSIPRMVRLSSSDSIGPDINDILSDIPDQANKGGNSSHGQHLMAG
EEGGSLGTPLRDSSSSGQGSTVFEADLFNANSNENPFTDAADLIAEAATAATPNSDSSST
NFFPDTDFNPELLPGQGSFSQTYFEDTSSSPDPDLELVKSFSGGSQQNTPTGTPQNPASH
GQNTPEALLKDPFEMGIFGGNGAGGKPILGPASDMADSHLSQTCGGQSPLMMGIVVAGND
FKSDDTKVKQQQIRAKEDHGPGNSGTGMGSVCSSEIKPVKRSRTPSSEGKSKDKSSKRKK
LDTDGKSPSHSSGGRPYTPPCGSATSGGLVSAGGSKSPGSSGRSQTPPGGATPPIPKITI
QIPRTLTGGKTSSHGGYTSSSSTSGSTGSTSGTSNSKSHHSYSSSSSGKIKSSKLEGSVG
QGNIPKPSSIVGIGSGMPSQSKGSSMGMGAGKQSSSPITKHGLSGSFSGGGSGTGSGNKN
KPQGGKPPGSLMNPNIKPNISPSHSRSGSSDKLSSPMKLQGQVPGTPPSSKAKSPIGSGS
GGSGGSKSSSGCGMGTQKLLGSSSSTSTSTSSTSSVSSSSSSGSIPFSSSGQSQYGNSGG
SCSGGGSGNNPNAKGKSPSRNKKPSLTAVIDKLKSVGSGGIGGEESEGCGGTAGGVVPQN
AGPTSSKHGMSSQGGEFLSKRDKIDKDGKSKVSGSGSNSGDKKMVDSKSSAVTGTGVAKI
IISKPEGGSPSIKSKVTLQKPGEISGDCAMRSQHSGHKASPLFSGSTPKHDRSSPSHSRS
PGYTPINPDSESESGSSSVAEKSHQNSASSDDDQTMRPHQPIPDYMSSISINQSEKHKKH
KKEKKKQKERDRDRDREKEKKKSTMSCGPPSHTAKTDGWSRSPISSETSMLLLSSERSSR
PSPVFMHTEDDDLMDSALTGNLEPFK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
agtcttttacgattacattccctcaataattgtcttattttttggtcattttgtttgcat
ttgttgacagagtcagagaaacagagtcgtttaacagcactactggaaaggctccatggc
aaacacaattcaacccggtcctggcaggagaccagcaaagtggtgcggcaggcaatggaa
aagcgtggggtcattaatacagctggaaacccactgctgctcaactgtttagagacactg
caaagggcacaaaaagtatcttcgctgccatcaatgacggatcgtctggagtccattgct
cggcagaacatgttgggatctcacctgagcccatcacgtactgagtgctatatcacctca
gatatgttttacgttgaggtgcatttggaaaaagcaggaaagcttgtggatgtcaaagtg
gcccaccatggtgaaaaccctgtgagttgtcctgagctgatacagcatttacgagacaaa
aattttgatgagttttccaaacacctgaagggtctggttaacctgtataagctccctgga
gacaacaaactaaagacaaagatgtatttggcacttcagtccctggagttagacctcacc
aagatgatgcatatgttcaggattgccactaatgccaacactgtggagaccatacttcat
ggtagtgtgggtctgttgacggcgaggagcggcggtcatctagtatctctacagtgttac
gtttctccaaatgatatctttgaagagggaacaggagcccaactgagcttcactgatgtc
aaaattccccgtactttaggtgtgagtgtgtcagtgactgttgagggcacaacatcggtt
tacaagcttcccattgctccgcttatcacaggatcccatccagtcgacaacaaagggact
ccatcattttcttccgtaacaaactcaaactgtgtagatttaccagcgtgtttcttcctg
aagatgaattgcttgatgccattctctgcattatatattaaaaaaatgggcagttctaca
ggcatccctgtttttgagactgcgcccaccttgtccccactatatgatctcatcattaag
agccaactgcatgaggatggaggggccagtcctcctgctttggcccaaacaatgcgtttt
tatgcatctttaccaggccagcagcattgttatttcctaaatggtgatgccccagtacag
gatgggaggtgtcttcaaggagctttggtttccaagattcccttcagacatcctgctcag
gtgcctgctctcctcgacattataagacaccaggccgcttacaacacgcttattggcagc
tgcgtcaaaaagacctacattaaggaagacactcctggactgctgcagtttgaagtgtgt
ccactaacagactcaagttttagtgtgtcctttcaacaccctgtaaatgaatcacttgta
tgtgtggtgatggaggtgattgattcgatgcaggtagcctgtaaactctataagggttta
tctgatgctttgatctgcactgatgacttcattaccaaagtagtccatagatgcatgtcc
attcctgtgactatgcgcgccatccgacgcaaggcagagaccattcaggcagacactcca
gcattgtcccttatagctgaaactgtggaaattatggtgaagaagaacttgcccccaact
ggcagcccaggttacatgggaatgggtacagggccagatgggagcaacccaatgggtctc
cctggtttaagtagtgggaccagcactgcaggaagcaacaatgtagggggaagcagttct
ttccaaggcccaatcacgtcacttttcaacatgagtcgtactggtcagggaggctcctgt
atggacaccatggtacaggttggaggccagcagcaagcaacgcaacaacaacaacaatct
cagagccatggttcagatgactttaacaaagtcactcagaatcctatcctaaccagtctt
ctgcaaataacaggcagtgttgggtccagtcctactccccagccacctcagccccaccag
accccaccaacaaccacctcaccagcaagcaacaccaaaaaccacccaatgctgatgaac
ctactgaaggataatccctcacaagattttgctgcattgtacagcagtagccctctagaa
agacagaactcatctgggtccccgcggacagatagtcaaggacagtcttgccctggcacc
aagggcaagaaaaagcgtccaagaggctctgataaaggagtaatgggtgcaggtggcgga
atgagcatgaaacaacaattccagcagcaagtgggaggcatgacccaacagcatcatcac
acacaccactctgaagatgatttccaccgagagcttttctctatggacgttgatgcctcc
cagaaccctatttttgatgttagtcttccaggtgatggacttgacactcctcatagtatc
actccagctccaagtcagtgtggaacacctccttcaggtcctggaatgccataccaccaa
cactgtcatgtccaaccccagacacaagtccagtctcagccacatggatctataccccgt
atggttcgcctctccagctctgacagtattgggcctgatatcaatgacattctgtctgat
attcctgatcaggccaacaaaggaggcaatagcagtcatggccagcacctcatggccggt
gaagaaggaggttccttgggaactccactccgggattcatccagttcaggccaaggtagc
acagtgtttgaggcagacctgtttaatgcaaacagcaatgaaaatccctttacggatgca
gcagacttgattgcagaagctgctactgcagcaacacccaatagcgattcttcctcaacg
aatttcttcccagacacagacttcaacccagagcttttacctggacagggaagcttttca
cagacctactttgaagacacctcctccagccctgacccagatcttgaactggttaaaagt
tttagtggaggaagtcagcagaacactcctacaggcacacctcagaatcctgcctcacat
ggccaaaatactcctgaggctctattgaaagacccttttgaaatgggtatttttggtggg
aatggtgctggaggaaaaccaatactgggtccagcatcagatatggcagactcacacctt
tctcaaacttgtgggggccaaagtccactcatgatgggcattgtggtagctggtaatgat
tttaaaagtgatgatacaaaggttaaacaacagcagataagggcaaaggaagatcatgga
ccaggaaattctggaacaggaatggggagtgtatgctcttctgaaataaagccggtaaaa
cgcagtcgcactccttcaagtgagggcaaatcaaaagacaaatcatcaaaacgcaagaag
ctggatacagatggcaagtcaccttcacacagctcagggggtcgaccttacactccacct
tgtgggagtgccacttccggaggattagtaagtgcaggtggatcaaaatccccaggaagc
tcaggcaggtctcagaccccaccaggaggtgctactccaccaatccccaaaatcactata
caaatacccaggactttaactggaggaaaaacatcatctcatggaggctacacatcaagt
agctcaacaagcggaagcactggtagtacaagtggcacaagcaatagcaaaagtcaccat
tcctactcttcctcttcttcagggaagattaaaagtagtaaacttgaaggctctgttggg
caaggtaatattcccaaaccatcaagcattgtaggtattggaagtggtatgccttctcaa
tccaaaggatcttccatgggaatgggcgcaggcaagcaatcctcctctcccataacaaag
cacggtttgtcaggctcattcagtggtggcggcagtggaacaggaagtggaaacaaaaat
aagccccaaggtggtaagcctcctggctcactcatgaaccctaacatcaagcccaacata
tcaccctcacactctcgttctggaagttcggacaagctgtcctctccaatgaaacttcaa
ggccaggtgcctggaaccccaccctcatctaaggctaaatcccctattggctcgggcagt
ggaggatcaggagggtccaagtcctcttcaggttgtggaatgggtacccaaaaactgtta
ggcagtagctcatccacaagcacttctacatcatctacttcctccgtaagttcctcatca
tcatctggctccatccccttttcttcaagtggtcagtcacaatatgggaacagtggtggg
agttgcagtggtggtgggagtggaaacaaccctaatgcaaagggaaagtccccaagccga
aacaaaaagccatctctaaccgcagtcattgacaaactgaagagtgtgggtagtgggggc
attggtggggaggagagtgaaggctgtggtggcactgcaggtggggtagtgccacaaaat
gctggtcctacatcctccaagcatggtatgtcctcccagggaggtgagtttctgagcaag
cgtgacaagatagacaaagatggcaaatccaaggtgtctggatcagggagcaattctggt
gacaagaagatggttgattccaaaagcagtgcagtgactggcactggtgtggcaaagatt
attattagcaagccagaagggggctctccaagcattaaatctaaagtaactcttcagaaa
cctggagaaatttctggagattgtgccatgcgttcccagcactcaggccacaaagcatca
ccactttttagtggctctacaccaaaacatgaccgcagctcccctagccacagccgttcc
cctgggtacacgcctataaatccagacagtgagagcgagtctggtagcagttcagttgct
gaaaagtctcatcagaacagtgctagctctgatgatgaccaaactatgagaccacaccaa
cccattccagactacatgagttccatatccattaaccagagtgaaaaacacaagaaacat
aaaaaagagaagaagaagcagaaagagcgggatagggacagagatcgagaaaaagaaaag
aagaagtcaacaatgtcttgtgggccgccctctcacacagcgaagacagatggctggtcc
agatcccctatatcttcagaaacttcaatgttgttgcttagctctgagcggtcctcacgt
ccaagtcctgtgtttatgcatacagaggatgatgacctcatggactctgccttaactggc
aatctagaacctttcaaataa
DBGET
integrated database retrieval system
