Rhinichthys klamathensis goyatoka (western speckled dace): 130088047
Help
Entry
130088047 CDS
T09701
Symbol
uhrf1
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130088047 (uhrf1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130088047 (uhrf1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130088047 (uhrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-RING_10
zf-C3HC4_2
PHD_2
Rad60-SLD
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
Prok-RING_4
DUF7303
Motif
Other DBs
NCBI-GeneID:
130088047
NCBI-ProteinID:
XP_056110621
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MWIQIRTIDGKETRTVEDLSRLTKIESLRVKIRDIFDVKPEQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQSDPPESPALNNGEGVAGVIAPPPTTSVPASATPTTTAVSPTTVS
NSNGNESKSLIPESGDSEPSTSSRTFLLDPGIGHFKVNELVDCRDVSIGAWFEGVIDKVT
PASKGQNRVGRPSKRTNGKLESEANADSTSAPEKGFNSDNSQSTTSKTDSANSRQDVSYH
IKYEDYPENGVVPMSPDDVRPRARTLLRFDQLQVGDVVMVNYNLELPEERGFWYDAEIST
LNAVSRTNKEIHVKILLGGPGDVIGDCKLQFLDEIYRIEKPGAPALSSSDGPFKRKSGPE
CKHCKADPDAECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYCLNPPLSSIPEDEDWYCP
TCKNDSSEVVKAGEKLRTSKKKSKMPSATTESQRDWGKGMACVGRTKECTIVPSNHYGPV
PGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGS
GGRDLSGNKRIGEHSFDQTLTHMNRALALNCDAPLNDKDGAESRNWRAGKPVRVIRSSKG
RRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDDLEPAPWTPEGTERSKKL
GLKVQYPPGYLEAMANKTKREATVRSVGGSTHTRGRKRGRPRSTRPTKRLQEEEEEKPVL
NTEEELQSNGSPDAPEEHNTSVCEEQEEPQVKHLKEVESFVLSEQQRNLIQEDEPNRKLW
DEALSFLTEGPNFLRKVEQMFMCVCCQELSFQPVTTECTHNVCKSCLQRSFRAEVFTCPA
CRHDLGRDYAMSLNKTLQLLLDQFFPGYSKGR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcagatccggacgatcgacgggaaagagacgcgcacggtggaggatctttcg
cgcctcacgaagatcgagtccctgcgcgtgaagatccgcgacatcttcgacgtgaagccc
gagcaacagagactcttctaccggggaaaacagatggaagatggtcagactctgtttgat
tacaacgtcggcctgaacgacatcgtccagcttctgattcgctcgcagtctgacccgccg
gaaagccccgccctcaacaacggggagggtgtggccggtgtcatagctccgcccccaacc
acgtctgtcccagcctcagccacacccaccacaacagccgtttccccgacaaccgtctcc
aacagcaacggaaacgagtccaaatccctcatcccggagtcgggtgacagtgagccgtcc
acatccagccgaacgttcctcctcgatcccgggatcgggcacttcaaagtgaacgagttg
gtggactgcagagacgtcagtatcggcgcctggttcgaaggcgtcattgataaagtcact
cctgccagtaaaggacagaacagggtgggccgacccagcaaacgcactaacggcaaactg
gagtctgaggcgaacgccgactctaccagcgcgccggagaaagggttcaactcggacaac
agccaatccacaacctccaaaacagattcagcaaacagccgccaggacgtctcgtaccac
attaaatatgaagattacccggagaacggtgtggtgccgatgagcccggatgacgtgcgc
ccgcgggccagaactcttctgcgcttcgaccagctccaggtgggagatgtggtgatggtc
aactataacctggagcttcccgaggagcgaggcttctggtacgacgccgagatctcgacc
ctgaacgccgtctcacgcaccaacaaagagatccacgtcaagatcctgctgggaggtccg
ggcgatgtgattggtgactgtaagctgcagtttctggatgagatttaccggatagagaaa
cccggagcgccagcgctgtcttcgtctgacggcccgttcaaacgtaagagcgggccggag
tgtaagcactgtaaagcggaccccgacgccgagtgccggttctgctcgtgttgtgtgtgt
ggagggaagcaagacgctcacatgcagctcctgtgtgacgagtgtaacatggccttccac
atttactgtctgaaccctccactgtcctccatacctgaggatgaagactggtattgcccc
acctgtaagaacgacagcagtgaagtggttaaagccggagagaaactccgaaccagcaag
aagaaatccaagatgccgtcggccacaacagagagccagagagactggggcaagggtatg
gcgtgtgtgggccgcactaaagaatgcacgattgtcccctccaatcactacggcccagtt
cctggcgttcccgtcggaaccacgtggaagtttcgtgttcaggtgagcgaggcgggcgtg
cacaggcctcatgtcggggggatccacgggcgcagtaacgacggctcgtactcgctggtg
ctcgccgggggcttcgaggatgaagtggatcggggtgacgagttcacctacaccggcagt
ggaggtcgcgacctctcggggaacaagcgtatcggcgagcactcgttcgatcagacgctc
acacacatgaacagggctctggcgctgaactgtgacgcccccctgaatgacaaggacggg
gccgagtcacgcaactggcgagcgggaaaaccggtgcgagtgatccgaagctccaagggc
cgacgcatcagcaaatacgccccggaggaagggaaccgctacgatggcatttataaggtg
gtgaagtactggccggagatcgggaagtgtgggttcctagtgtggcgataccttctccga
cgggacgacctggagccggcgccctggactcctgagggaaccgagcgcagcaagaaactg
ggcctcaaagtccagtatcctcctgggtatctggaggcgatggccaataagacgaagcgc
gaggcgacggtgcgatcggtgggcggatccacacacacgcgcggcaggaagagagggaga
ccccgatccactcgcccgaccaagagactccaggaggaagaggaggagaagccggtgctg
aacacggaggaagagctgcagagcaacggcagtccagacgcccctgaagaacacaacaca
agtgtgtgcgaggagcaggaggagccgcaggtgaagcatctgaaggaagtggaatcgttc
gttctgtcagaacagcagcggaatctgatacaggaagacgaacccaacaggaagctgtgg
gacgaagcactgagcttcctcacggagggaccgaacttcctgcgtaaggtggagcagatg
ttcatgtgtgtgtgttgtcaggaattatcctttcagcccgtcaccactgagtgtactcac
aacgtctgcaagtcgtgtctgcagaggtcgttccgcgctgaggtcttcacctgccccgcc
tgccgccacgacctgggcagagattacgccatgagcctcaacaaaaccctccagctgctc
ctggatcagttcttccccggatacagcaaaggacgatga
DBGET
integrated database retrieval system
