Rhinichthys klamathensis goyatoka (western speckled dace): 130088075
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Entry
130088075 CDS
T09701
Symbol
sema4c
Name
(RefSeq) semaphorin-4C
KO
K06521
semaphorin 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rkg04090
]
130088075 (sema4c)
CD molecules [BR:
rkg04090
]
Proteins
130088075 (sema4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Paramecium_SA
ig
Motif
Other DBs
NCBI-GeneID:
130088075
NCBI-ProteinID:
XP_056110652
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MGCAKVLLVMFVIGFEKGICVNWNPVPRKTVKYNDVHDSMARFRAVGVWNYTMLTLAEHE
RVLYVGAREHIFALDPNDISRQLRPQIEWSAPVEKKRECAAKGKNNQTECFNYIRFLQSY
NHTHLYTCGTYAFQPKCTYINADHFTLDSAAPEDGKGKCPYDPAKGHTGLIVDKELYSAT
LNNFLGTEPVILRNLGQQHYSMKSEYLPAWLNEPNFVGSALVRESRNSKDGDDDKIYFFF
SERALELDCDSDLTVARVARVCKGDLGGTRTLQKKWTTFQKARLMCSFPERHITFNNLRA
VFTLPGADWRSTSFYGIFHAQWGDVDVSAVCQYQIGEVKNVFDGPYKEYRESSQRWVRYT
STVPSPRPGACITNFDRENGYNSSLQLPDATLNFAKKHPLMELRAEARPLLLTKGINFTR
IAVDRVSSLDQRSYNMLFIGTADGWLQRVVILGSEAHVIEEIQLFDRQQPVDSLTISHSK
KYLYIGSRSEVLQLPLANCSRYHSQPDCLLSRDPYCAWDSEGRACVRIDLHRGSTSTLSQ
DLMLERFNRGKAKFDKPFSIPSPDHSRLRNVTVVVGSDLVLPCNLVSNLAQPFWELNERE
LALVEGEAIGPRFDRALRSLVIPQAGSLQAGRYICYSEEQGVKFQTERYQVAVVASAPVF
MEARAPDGSMGLFWVLVITLGAACLLLLIASLYLRRRLKLALGKGAEMKPLESTLVYPIT
LPKEPPSRPSFVPSKMANDDDRFWETGANYYYSDGSLKIVPGHAMCSTGSTASPSAIPGQ
PIHSPSRLSLTNIRNSGTNGYIRLNLSTAGEERASTGSGMGMGSGLGLGSRENDYTSPFK
EELRRTLQQRSVLPDANPEESSV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtgcgaaagttcttctcgtgatgttcgtgatcgggtttgaaaaggggatttgc
gtcaactggaaccccgtcccacgcaagacagttaaatataatgatgtgcacgacagtatg
gcgaggtttcgcgctgttggggtgtggaactacaccatgttgaccctggcagaacatgag
agggttttatacgtgggcgccagagagcacatcttcgccctggatcccaatgacatcagc
agacaactccgaccacagattgagtggtcggctcctgtggaaaagaaaagagagtgtgca
gcgaaggggaagaataaccagactgagtgcttcaactacattcgtttcctgcagagctac
aatcacacacacctgtacacatgcgggacatacgccttccagcccaaatgcacctatatt
aatgcagatcatttcactctggatagcgccgccccggaggatggtaagggaaagtgcccc
tacgaccccgccaagggtcatacaggcctcattgtggacaaagagttgtactccgccacc
ctcaataacttcctgggcacagagcccgtaatcctgaggaacctgggacaacaacattac
agcatgaagagtgaatacctaccggcttggctcaacgagccaaactttgtgggttcggcg
ctggtccgggagagccgtaacagtaaagatggagacgacgataagatctacttcttcttc
agcgagagagcgttggagctggactgcgacagcgatctgaccgtggcacgggtggcgcgt
gtgtgtaagggagacctgggtggcacacggaccctgcagaagaagtggacgaccttccag
aaggcccggctgatgtgttctttccccgagcgccacatcacctttaataacctgcgggcc
gtcttcaccctgcctggggcggactggaggagcactagtttctatggcatcttccatgcg
cagtggggggatgtggatgtgtctgctgtgtgtcagtaccagatcggagaggtgaaaaat
gtgttcgacgggccgtataaagagtacagggagtcgtctcagcgatgggtccgatacacc
agcactgtgcccagtcctcgacctggagcgtgcatcacaaactttgatagggaaaacggc
tacaacagttctcttcagctgcctgacgctacgctaaactttgccaagaagcatccgcta
atggagctcagggcggaagctcgccccctgctgcttactaaagggatcaacttcacccga
atagctgtggacagagtgagctcactggaccagagatcctacaacatgctcttcataggc
acagcggatggatggctccagcgtgtcgtgattttgggttcagaggcccatgtgatagaa
gagatccagctgtttgatcggcagcaaccggtggacagcctcaccatctcgcacagcaaa
aagtatttgtacattggctcacgctctgaggttcttcagctgcccttggcaaactgcagc
cggtaccattcacagccagactgcctgctgtccagagacccgtactgtgcctgggacagc
gagggacgcgcttgtgtccgcatcgacctccaccgcggctccacatccacactctcgcag
gacctcatgctggagaggttcaaccgaggaaaagccaagtttgataagcctttctccatc
cccagccctgatcattctaggttgagaaatgtgactgtggtcgttgggtcggatctggta
ttgccctgcaatctggtttccaacttggcccagcccttctgggagctcaacgaacgtgag
ctggccctcgtggaaggtgaggccattgggccgcgattcgacagagccctccgctccctc
gttatcccccaagccgggtcccttcaagcgggccgctacatctgctactcggaggagcaa
ggcgtgaagttccagacggagagataccaggtcgcagtggtggccagcgcgcccgtcttc
atggaggcccgcgctcctgacggcagcatgggtttattctgggtgctggtgatcacattg
ggtgccgcttgtctgttgctgctaatcgcgtctttgtaccttcgtagaagactgaagttg
gcactgggaaaaggggcggaaatgaagccgctggagagcactttagtgtaccccattact
ttacccaaagagcctcccagccggccatcattcgtgccgagcaagatggcgaacgatgac
gatcgcttctgggaaacgggagctaattactactactcggacggctcccttaaaattgtc
ccagggcatgcaatgtgctccaccggcagcacggcatctccgagtgctattcccggtcag
cccatccactcgccgagcaggttgagcctcaccaacatccgaaactcaggcaccaatgga
tacatccgcctgaatctgagcacggccggagaggagagagcgagcacgggatcgggaatg
ggcatgggaagcggactcggactgggcagccgagagaacgactacaccagcccattcaaa
gaggagctccggagaactctgcagcagaggagcgtgcttcccgatgccaatcccgaggag
tcttctgtgtag
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