Rhinichthys klamathensis goyatoka (western speckled dace): 130088107
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Entry
130088107 CDS
T09701
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130088107 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130088107 (ppil2)
03110 Chaperones and folding catalysts [BR:
rkg03110
]
130088107 (ppil2)
04121 Ubiquitin system [BR:
rkg04121
]
130088107 (ppil2)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
130088107 (ppil2)
Spliceosome [BR:
rkg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130088107 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
130088107 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
130088107 (ppil2)
Chaperones and folding catalysts [BR:
rkg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130088107 (ppil2)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
U-box type E3
130088107 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
130088107
NCBI-ProteinID:
XP_056110703
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTQFYGGKKSEIPRSNFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKKFGTNPITGEKLEAKSLIKLNFSKNSEGKYHCPVLYTVFTNNSHIVTNK
VTGNVFSNEAVEQLNIKTKSYKDLLTDEPFTRQDLITLQDPTNLDKFNVSNFFHVKNNLK
VLDPDEEKAKLLPGYHLKTTNLETRETLAELYRDYKGDQLLASTMKEPETKKTDKFNAAH
YSTGRVSASFTSTAMAPATTHEADAIADDTVRYQYVKKKGYVRLHTNKGDLNVELHCDKV
PKAGENFIKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDRKHTVFGRVVGGLEALTAMENVESDPKTD
KPKSEIKLLSASVFVDPYEEADAQIAAEREKEAQKQEEERAQTSASVKAKTEDKPKVFKP
GVGKYINMAATKHSHPDGDKPSTSEAPAKKHKGKTGFGDFSSW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgacagcatcaaaaagataagatgtacatcacatgtacagaatacactcag
ttttatggagggaaaaaatcagaaatcccacggtccaatttcagacgtctgccctttgat
cattgcagtttgtctcttcagccctttgagtatcccatgtgcacagtggatggggtggtt
tttgacctaatgagcattgtgccttggattaagaagtttggtaccaaccccataactgga
gagaagcttgaggctaaatccctcatcaagcttaacttcagcaaaaacagtgaagggaag
taccactgtcctgtgctctacacagtgttcacaaacaactcccacattgttaccaacaaa
gtcacagggaatgttttctctaatgaggcggtagagcagctcaacatcaagacaaagagt
tataaagacctgctgacggatgaacccttcacccgccaggatctcatcacactacaggat
cccacaaatctggataaattcaacgtctctaacttcttccatgtgaaaaacaatttgaaa
gtccttgaccctgatgaagagaaagccaaactgctaccaggataccatctgaaaaccaca
aacctggagacgcgagaaaccctggcggagctctatagggactataaaggagatcagctg
ttggcctccactatgaaagagccagaaaccaaaaaaacagacaagttcaatgctgctcac
tattccactggaagagtgtctgcctccttcacatctacagctatggctccagccaccacc
catgaagcagatgctattgcagacgataccgttcgctaccagtacgttaagaagaaaggc
tatgtgcgcctacacacaaacaaaggagacctgaatgtggagttacactgtgataaggtc
cccaaggcaggagaaaactttattaaactgtgtaagaaaggatattatgatggcacagta
ttccaccgctctattcgaaattttatgattcaaggaggagaccctacagggactggtaca
ggaggcgagtctttctggggaaagccgttcaaggatgaattcaggcctaatctgtctcac
acgggtcgtgggattctgagcatggctaactcaggacccaacacaaataaatcccagttc
tttataacattccgctcgtgcgcatacctggacaggaaacacactgtgtttggaagagtg
gttggtggtttagaggctctcacagcaatggagaatgttgaaagtgatccgaagacagac
aaacccaagtctgagataaagttgctgagcgcttcagtatttgtggatccgtatgaggaa
gccgatgcacagattgcagccgagcgagagaaggaagcacagaaacaggaggaagagaga
gcgcaaacttctgcttcagtcaaagcaaaaacagaggacaagcctaaagtcttcaaacca
ggagtgggcaaatacatcaacatggctgccacgaaacattcccacccagatggtgacaaa
ccctccactagcgaagctcctgccaagaagcacaaaggcaaaacaggttttggagacttc
agttcctggtag
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