Rhinichthys klamathensis goyatoka (western speckled dace): 130088152
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Entry
130088152 CDS
T09701
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130088152
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130088152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
CUE
Motif
Other DBs
NCBI-GeneID:
130088152
NCBI-ProteinID:
XP_056110762
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MMNMLELPVPFQLVSNIYPHNGHLSDIAYRVPWTNKISMGTLQVTGSVMDYLKASIRFSD
CLERLNVLQTGRGLEEVVPSSNPASQCSIGTSEVLWLLDGVESGAIRSPWEETFSPCTPD
ACCFTSDDLTLPEEVIFGDHLQRFKSHMPPFQTMLQRLKIMAVSDPVLNSSVHLLEGVVF
RHCASYDAVLDEVTGATFTGGNVTEEFKKEAVLNEESLMLPVEVCMDSFRRQEPIFSIAK
MQDFLNVTREQIEECLPLKDLLKEATSAYKHTTELEVLQMAESSFANMTFKEPKSPGVAS
RSSAEMELDLPLSPCNHTLCLPDLFMSSRKLSAEILSPVYKQHFMSDSHCENMEKAVWMA
EKNLQCVSQSLLAEPQVNKPLVHIQSLPELLTPLKVEMEPVPEPKDKMGQFHLTDSTVTV
PENFTNLFIYTEKMSTEECKTAVRESHIDEIFSPLSIRKIDELLGECPSDAALPPSSHPT
AVHPSQSKPLQSAVPTQVERGTTVKFFIMEGMSHQGDSSTVTTAGGIDCKAAEIEKRISS
PPEKWFGSQTNSSTCLSEKQHRFSKVVEMSKSSPLKHCVKDIEVISAIHKLPEKSDQRRE
NITSKSSLLSNCLRGRKGNNSVVQSYEDLDPLLSFVAVRTMEKLQRSSPTSAEVTRCQDP
TGKALLDNRINAVNHASDTGRIVIATEKTFPCEEIQETISKIVYVQATESQRDAYRELHA
LALPSLGKMQKLGISALNNRDFGTLSSELTRFLLKQQDRMLRTEQDADSVFNEMALLHIL
VMLKEHVLFRCDLNAATEYLAQAKDSCTRSCLDELLKKFEVLQYLSQKSQESNPKLLELQ
EQINTWMNSHANHNTRVLVLTVNSVNKKLLAALNQVSENAVSEIVPDEGKLKVVSREVMD
RLSYSRCVVVCSQHIGPDFPWQSFSMVFELSCVGHSPFGSVCSERNVNFISFSTAVPETI
SSAADIPEESTAKSYLDTIPFVLLITDGLLNRLKMQRTLQTTYNIVLLERKHSPSALQLG
GTHYDVITVDETTAILIQELSELEKKIGEASERVVKRLSALSLQFSRCWLILHCAENHRA
LISSNIYINLVHIYSASVLFGSKSDKFDVKVLMVCEEEEIASYIYRISLHTLMNSERDGL
SWLDRDWLSMQPTKAEHCLLQFPCINPLVAQLMLRRAPSLQWLLGASFSELQEMFPQIPH
KVIKLFSDITTESKVKTATMKSENTPLSHKNSPAHPPHPHLPLWTQDLDPLHLEDKTPRS
QLIAGHNRRRGEETWRKNELSLPDSTHSHSFNPFLPSPFSQASATASAWQPQGEGFIQNP
NLVPGRAVPRGSARVPLAPLPTPEVLGYRNTACAFSFRPQGQTHRSSPENDPPHRTGEER
KRRGGEDAQSVPPHSKRGKLLYERVPGRNDGQTRLRFF
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatgttggaacttccagttccgttccagctagtcagtaacatctaccctcac
aatggacacctgtcagacatcgcttaccgagtgccatggacgaacaaaatatccatgggt
acgctacaagtgactggatctgtaatggattacttgaaggccagcatacgtttcagtgac
tgtttggaaaggctcaatgtgttgcagacaggaagaggactagaggaagtggttcccagc
tctaatcctgcctctcagtgcagtattgggacctcagaagtcctctggcttttagatgga
gttgagagcggtgccatcagatcaccttgggaagagactttcagtccatgtacgccagat
gcatgttgctttaccagtgatgatctcactctgccagaggaggtgatattcggtgatcat
ctgcagcggttcaaaagccacatgcctccatttcaaacaatgcttcagaggctgaagatc
atggctgtctcggatcctgttctcaattcatcagtacatcttttagaaggggttgttttt
agacactgtgcctcatacgatgcagttttagatgaagtaacgggcgccacgtttactgga
ggaaatgttacagaggagttcaaaaaagaggcagtactgaacgaagaatcactaatgttg
cctgttgaagtttgtatggattccttccgaagacaagagcccattttttccatcgcaaaa
atgcaagattttctaaatgtcacccgagaacaaatagaagaatgtttacccttaaaagat
cttcttaaagaagccacctctgcttataaacacacgactgagttggaggtcctgcaaatg
gctgaaagcagctttgctaacatgacctttaaggagccaaagtctccaggtgttgcttca
aggtcttctgctgagatggaattagacctgcctctttcaccttgtaatcatacgctgtgt
ctaccagacctgtttatgtccagcagaaagctgtcagctgaaatactgtcaccagtttat
aagcagcatttcatgtcagacagtcattgtgaaaatatggaaaaagcagtttggatggca
gagaaaaatctccaatgtgtgtctcagtctttacttgctgaaccacaggtaaataagccc
ttggtccacattcagtcacttccagagcttctcacaccactgaaggtggagatggaaccg
gtcccagaacctaaagacaaaatgggccagtttcatctcacagacagtacagtgacggtg
cctgaaaacttcacaaatctcttcatctatactgagaaaatgtccacagaagaatgcaag
acagctgtgagagagtcgcacatagatgaaatattctcaccactgtccattaggaaaata
gatgagttgctgggtgaatgcccttcagatgctgcgctgccaccttcaagccatcccact
gcagttcacccttcccagagtaagcctctgcagtcagccgtacctacacaggtggagaga
gggacgactgtgaagttctttataatggagggcatgtctcaccaaggagacagttctaca
gtgacaacagctggaggaatagactgtaaagctgcagagatagagaaacgcatctctagt
ccaccagaaaaatggtttgggagtcagacaaattcctccacatgtctttcagaaaagcaa
caccgcttttctaaagtggtcgagatgtctaagtcgtctccattgaagcactgtgttaaa
gatattgaagtgatatccgctatacacaaacttcctgagaagtcagatcagagaagagaa
aacataacctctaaatcatctctgttatcaaactgtttgagaggcagaaagggaaacaat
tctgtagttcagtcttacgaagatttggaccctttattgtcttttgtggcggtaagaacg
atggaaaaacttcagcggagcagtccaacatctgcagaggtaaccagatgtcaggatcct
actggaaaagctttgctagataacagaataaatgcagtgaatcacgcctcagatacagga
aggattgtcattgccactgagaaaacctttccctgtgaagagatacaagagaccatcagc
aagattgtatacgtccaagccacagagagtcagcgagatgcatatagggaactgcatgcg
ttggctctgccctctctgggaaaaatgcagaagttgggcatctccgctttgaacaacaga
gactttggcactctgtcttccgaactcacacgattcctcctaaagcagcaagaccgaatg
cttcggacagaacaggatgctgacagtgtgtttaatgagatggcactgctacatattctg
gtaatgcttaaggaacacgtcctgttcagatgtgacctcaacgcagccactgagtacctg
gctcaggcgaaggactcctgtactcggagctgtttggatgagctgttgaagaagtttgag
gtgttgcagtatctgagtcagaagagccaggagtccaaccctaaactactggagctccag
gaacaaatcaacacctggatgaactcccacgccaaccacaacactagagttctagtgttg
acagtgaacagtgtaaataaaaagctgctcgcagctctcaaccaggtatcagaaaacgct
gtgtctgaaatcgtcccggatgaaggaaagcttaaagtcgtgagcagagaagtgatggac
agactgtcctacagtaggtgtgtcgtcgtgtgcagtcagcacattggtcctgatttccca
tggcagagtttcagcatggtgtttgagctttcctgtgtgggccactcgcccttcggcagt
gtgtgttcagagagaaacgtcaactttatctccttctccactgcagtgcctgaaaccatt
tcatctgcagcagatatcccagaagaatcaactgctaaatcatatctggacactattccg
tttgtgttgctcatcactgatggtttactgaaccgcttaaagatgcagcgcacactgcag
acaacatacaatattgttctgctggagaggaaacactctccatctgcactgcagctgggc
ggaacccattatgatgtcatcactgtggatgagaccactgccatcctcatccaggagctg
agtgagttggagaagaagattggagaagcatctgagcgtgtcgtcaagagactctcagcc
ctatctctgcagttcagccgttgctggctcatcctgcactgcgccgagaaccacagggca
ctgatttccagtaacatctatatcaatctggttcacatctactctgcatctgtgttgttc
ggaagcaagtctgacaagtttgatgtcaaggtgttaatggtgtgtgaggaagaagagata
gctagctacatctatcggatctccttacatacactgatgaattcagagagagatggactg
agctggttggatagagactggctcagtatgcagcccacaaaggcagagcattgcctattg
cagtttccctgcattaatcctctggttgctcaactgatgttgaggagagctccatcgctg
cagtggctgctgggagcttctttctctgagctgcaggaaatgttcccacagatccctcac
aaagtcattaagcttttcagtgatattacaactgagtccaaagtcaaaacggccaccatg
aagagtgagaatacacccctctcacacaaaaacagcccagctcaccctcctcatcctcat
ctgcctctctggactcaggatcttgatccgttacatctggaggataagacgccacgtagc
cagttgattgcaggtcataacagaagaagaggagaggaaacatggagaaaaaacgaatta
tcccttccagattcaactcactctcactcattcaacccctttttgccaagtccattcagc
caagcttcagctacagcgagcgcctggcagccgcagggtgaaggattcattcaaaaccca
aatctagtgccaggccgagctgttccccgagggtctgcccgtgttcccctggctcctcta
cccactcctgaagtgctggggtacaggaacactgcgtgtgcattcagctttaggccgcag
ggtcagactcaccggagctcacctgagaacgatccgcctcacaggacaggagaggagagg
aagaggcgaggaggagaagacgcccagagtgttcctccacacagcaagagaggaaaactg
ctatatgagcgagttccaggcaggaatgatggacagaccagactgagatttttctga
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