Rhinichthys klamathensis goyatoka (western speckled dace): 130088284
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Entry
130088284 CDS
T09701
Symbol
psme4a
Name
(RefSeq) proteasome activator complex subunit 4A isoform X1
KO
K06699
proteasome activator subunit 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130088284 (psme4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rkg03051
]
130088284 (psme4a)
Proteasome [BR:
rkg03051
]
Eukaryotic proteasome
Regulatory particles
PA200
130088284 (psme4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
130088284
NCBI-ProteinID:
XP_056110978
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MTISKIIEVEEPQLGDCNMKKEAFDLLGFVPQKDIVYNELLPYKDKLDEESNEILAQIKG
NLGRAVQLREIWPGVLFWTRKLSTYMRLYGRKFSKEDHVLFVKLLYELVTIPKLEISLMQ
NFARLLITLLKKKELLSREDIELPWRPLYELQDRILYSKTEHLGLNWFPSSLRPRSSSKH
ILVKLAQRCSVEGVLKALIKNCRPYFPESATQEMLDEWKPLMCPFDVSMQKAMGYFELFL
PTTLPPELHDKGFKLWFDELISLWVSVQNLPSWEVNLVTLFARLANDNIGYIDWDPYIPK
IFTRILRSLNLPVGSSQMLVSRYLTNAYDIGHVVTWISALLGGPSKQTQTQLSGLFSSIT
LFLHPSNHGRWLMKLMKLLQRLPASVVKRLHRERYRTPTWLTPVPESHLLSEQDITDFVE
SMREPVLLAMFSKTGSLDAAQALQNLALLRPELVIPPVLEKTYPAMETLTEPHQLTATLS
CMISVARSLVAGGKSFPEGPTHMLPLLMRALPGVDPNDFSKCMITFQLLATFVTLVPLVD
CSAAVQTRNDLTQVEKELCSASAEFEDFVLQFIDRCFALIDISTLEQTREEMETEKMTHL
ESLLELGLSSTLYTILTQCSMEIFQVALKKVFNFATTNIFETHVAGRMVADMCRAATKCH
PAEALKLFLPHCCNAILQISSNEEVLNEEELDKELMWNLQMLSEVTRVDGDQLLLYRSQL
VQILQLTLHLKCKPGYSLACKLLYHILRSSSLIYPREYCSVPHGARQHTDTYLPIKDWGR
PGDLWKLDIQWHVPSTEEKEFVFYLLDLLLKPELQRLQKHTQGEQDMSRDDVLQSLSIVH
NCLLGASPLLPPVNGEPVPELINSMVQLNETKVYTGVDYDLSRENYREDICKTIRPLLHY
TLEHSEDDIKSLFSIIKIINDLLHFKGSHKHEFDSRWKSFSLIKRSMENKLHGSKQHIRA
LLIDRVMLQHELRNLTIDGCSYRYVHQDLMKDLLRLSTSRYSQVRSKAQNALFTALATYN
FCCRDIIPAVLEYLDPDRTDVTQQQFKGALYCLLGNHSGVCLATLQYWDCIALTWPAVVR
SGMSPSMSLEKPSIVRLFDDLADKIHRQYETIGFDFSIPESCVDVALKIMKSSNPEPTPR
DASEQEEMEGRKRQEQKNKDSVQKYENLVVDLLDCLYDRNIPWKFEQIAIGFLSLMLRDD
QPLPSSAVLFFIESLNHDSLLVRNGAISAVSGILKQLKRPHKKVAVNPYDISELKTSLQS
RDGKALGSLLVGDRPDNQWLQYDSSRLPLSQQDWDECCFIEKTHWGYSTWPRSLMLYAPP
EQQPKQGKTREEMNESERIIYDHFSDQLFVDQFIHYLSLEDRKGNDKFSPRRFCLFKGLF
RNFDDAFLPLLKPHMERLVEDTHESTQRCVAEITSGLIRGSKHWSYSKVEKLWALLCPLL
RKALSNITIETYADWGTCIATACESRDPRKLHWLFELLMESPVTGKGGSLVDACRLYVLQ
GGLAQQQWRVPELLHRLLQYLEPKLTQVYKNVRERIGSVLTYIFMIDVSLPHTQPTTSPR
IGEFTERVLARLKPLTEGEEEIQNHIVEGNTEGGQDERTQAIRLLKTVLKWLMTSTGRSL
SSAVPEQLRLLPLLFKIAPVENDDSYDEMKRDAKTCLSLMSQGLLYSEQIPQVLSALEEI
SRSSSWHARYTVLTYLQVMVFYNLFTFLSDALAVGDVRALVLHLLQDEQLEVREMAATTL
SGLLQCNFLSIDEPMQAHFESLSKTRLPKRRRRELGSVVDTIPSADLVQRHAGVLGLSAC
ILSSPYDVPTWMPQILMDLSAHLTDTQPIEMTVKKTLSDFRRTHHDNWQEHKQKFTDDQL
LMLTDLLVSPCYYA
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgactatctctaaaataatcgaagtggaggagccacaattgggggactgtaatatgaaa
aaagaagcattcgatttattagggtttgttccgcaaaaagatattgtttacaacgaactt
ctgccttacaaggacaaactagacgaagagtccaatgaaattttggcacagatcaaagga
aacctaggccgagccgtccaactcagagagatatggccaggtgtcttgttctggacgagg
aaactttccacgtacatgcgattatatggaaggaagttcagcaaagaggaccatgtgctt
ttcgtcaagctgctgtacgagctggtcaccatccccaaactggagatcagtttgatgcag
aactttgcccgtctcctcatcacccttctgaagaagaaggagctgctttcaagagaggac
attgaattgccatggcgacccttgtatgagttgcaggacaggatcctgtactcaaagacc
gagcacctcggcctaaactggtttcccagttctctgcggccacgctcttcctctaaacac
attctcgttaaacttgctcagaggtgctcagtggaaggagttctgaaggccttaatcaag
aactgcaggccttatttcccagaatcagcaacacaggagatgctggatgagtggaaacct
ctgatgtgcccttttgacgtgagcatgcagaaggcgatgggatattttgagctcttcctg
cccaccacactccccccagagctgcatgataagggcttcaaactttggtttgacgagttg
ataagcctgtgggtgtcggtgcagaaccttccaagctgggaagtgaatcttgtcactctt
tttgcacgactggcaaatgacaacattggttacatagattgggacccttatataccaaag
atcttcaccaggatcttgaggagtcttaatcttcctgtaggatccagtcagatgctggtt
tccagatatctgacgaatgcctatgacatcggtcatgtggtcacctggatttctgctttg
ctgggagggccaagcaaacagacccagacccagctcagtggccttttcagcagtatcacc
ttgtttttacacccttcgaaccacggccgctggctgatgaaactcatgaaactccttcag
cgtttacctgccagcgttgtgaaacgtctgcatcgagaacgttaccggacgccaacgtgg
ctgacccctgttcccgaaagccaccttctcagtgagcaggacatcacagactttgtggag
agcatgagggagcccgtccttcttgccatgtttagcaaaaccggcagtctggatgctgcc
caggccctgcaaaaccttgctctgctcagacccgagttggtcattcctccagtgctggag
aagacatatcccgccatggagaccctcactgagcctcaccagctgaccgccactttaagc
tgtatgatcagtgtggcacggagcctggtggccgggggcaagagttttccagagggcccc
acacacatgctgcctctcctcatgagggctctgccgggggtcgaccccaatgacttcagc
aagtgcatgataacattccagttattagcaacttttgttactcttgtgccattggtggac
tgttctgctgctgttcagacaagaaatgacctcacgcaggtggaaaaagagttgtgttct
gcctctgcagagtttgaggattttgttcttcagtttattgataggtgttttgcactgatt
gacatcagtactctggaacagacccgggaggagatggagacggagaaaatgactcatctc
gagagtctgttggagctgggcctgtcctccacactctacactatcctcacacaatgctcc
atggaaatatttcaggtggctctcaaaaaagtcttcaactttgccactacaaacattttt
gagactcacgttgctggacggatggtagcagacatgtgccgagctgcgaccaagtgtcac
ccggcagaagctctgaagctctttttgcctcactgctgtaatgccatattacaaatctca
tccaatgaagaggtattaaatgaagaggagctggataaagaactgatgtggaacctccag
atgttgtctgaggtgacccgtgtggatggcgatcaactgctgctctacaggtctcagcta
gtgcagattcttcagttgactctgcacctgaaatgtaagccgggctacagtctggcttgt
aagctgctctatcacatcctgcgttcctcatccctcatctatcccagagagtactgcagc
gttcctcatggtgccaggcagcacactgacacatacctaccaatcaaggactggggtcgg
cctggagacctgtggaagctggacatccagtggcacgtacccagcacagaagagaaagag
tttgttttctacttgctggatctgctgttaaagccggaactccagcgtctgcagaaacac
acacagggagaacaggacatgagcagggatgacgttcttcagagtctgtctattgttcat
aactgtcttctgggagcaagcccccttctgcccccagtgaatggagaacccgtcccggag
ctgatcaacagtatggttcagctaaacgagacaaaagtgtacactggagtagactatgac
ctgtctagagagaactacagagaggacatctgtaagacaattagacctttactacactac
acactagagcactcagaagacgacatcaaatccctcttctccattataaagatcatcaat
gacctgctccactttaaaggctcacacaaacatgagttcgactcccgctggaagagtttc
agtctgattaagaggtctatggagaacaagcttcacggcagtaaacagcacattagagct
ctactcatagacagagtcatgctgcaacatgagttaagaaatctgaccatagatgggtgt
agctacagatatgttcatcaggacctgatgaaggacctgctcagactgtccaccagcaga
tacagtcaggtgaggagtaaagctcagaatgcgctgttcacagcattggcaacctacaac
ttctgctgcagagacatcatccctgcggtgctagagtacctggacccagaccgcactgat
gtcacccagcagcaattcaaaggtgccttgtactgtctgttagggaaccactctggggtc
tgtcttgctaccctgcagtactgggactgcatcgctctgacatggcctgccgtcgttcgt
tctggcatgagcccctccatgtctctggagaagccttcaatcgtgcggctcttcgatgac
ctggccgacaagatccaccgccagtacgagaccatcggttttgacttttctattccggag
agttgtgtggatgttgccctaaaaattatgaaatccagtaatccagaaccgaccccacgt
gacgcttctgaacaggaggaaatggagggaagaaagagacaggaacagaaaaacaaagac
tcagtgcagaagtatgagaatctagtggtggatcttttggactgcctttacgaccgaaac
atcccctggaagtttgagcagatagcgatcggcttcctctctctgatgctgagagatgac
cagcccttgccttcctctgcagtcctctttttcattgagagcctgaaccacgactctctc
ttagttcgcaatggtgcaatatcagcagtgagtggaattctaaagcagctcaagagacct
cacaagaaagtggcagtgaatccctacgacatttctgaactcaaaacctctcttcagtca
cgtgatggtaaagctctaggttctctgttggtgggagacaggcccgataaccagtggctg
cagtatgacagcagcaggttgccgctctcccaacaggactgggatgaatgttgcttcatt
gagaaaacccactggggttattccacatggccacggagcctgatgctctatgcccctcct
gagcaacagcccaaacagggcaaaacaagagaagagatgaatgagagtgaacggatcata
tatgatcatttctcagaccagctgttcgtcgatcagttcatccactatttgtctctggag
gacaggaaggggaatgataaattcagcccacggcgattttgcctctttaaggggcttttc
cggaactttgatgatgccttcctgcccttgctgaagcctcatatggagcgtctggttgag
gatacccatgaaagcacccagcgctgtgtggcggagatcacctctgggctcatcaggggc
tccaaacactggagctacagcaaggtggaaaaactgtgggctctgctatgtccactcctc
cgtaaagctctctccaatatcaccatagagacgtatgcggactggggcacctgcattgcc
actgcctgcgagagccgagacccacgaaagctccactggctgtttgagttgctgatggaa
tcaccggtcacaggaaaaggaggctcgcttgtggacgcctgccgtctgtatgtgctgcag
ggaggtcttgctcagcagcagtggagagtcccagagctgcttcacaggttactacagtac
ctcgagcccaagctcactcaggtctacaagaacgtacgcgaacgcatcggcagtgtgctc
acctacatcttcatgatcgatgtgagcctgccacacactcagcccaccacgtccccgcgc
atcggagagttcacggagcgtgtgctggccagactcaagcctttaaccgagggcgaggag
gagatccaaaaccacatagtggagggaaacacggagggaggtcaagatgagaggacacag
gccatcagattactcaaaactgtgttgaagtggttgatgaccagcactggacgctccctc
tcttctgctgtcccggaacagctgcgtctcctccctctcctcttcaaaattgctcctgtg
gagaatgacgacagctacgatgagatgaagagagacgctaagacatgtctgtctctcatg
tcccaggggctgctgtactcagaacagatcccacaagtcctcagtgcacttgaagagatc
tcaaggagcagctcgtggcacgcacgttacaccgttctcacctacctgcaggttatggtc
ttctacaatcttttcactttcctcagtgatgccctggctgtcggtgacgtgagagctctg
gtactacacctgctacaggatgaacaactagaggtgagggagatggcggccaccactctg
agtggattactgcagtgtaattttctcagcattgatgaacctatgcaggcccattttgag
tccctgagcaagacccgtctgcccaagcgtaggaggagagagctgggctccgtggtggac
acaatcccttctgctgacctggtgcagcgacatgcaggtgtattaggtctgagtgcctgc
atcctgtccagcccgtatgatgtgcccacatggatgccccagatcctcatggacctgagt
gcccacctcactgacacacagcctatagagatgactgtgaagaaaacactgtcggatttc
cgtcgcactcatcatgataactggcaggaacacaagcagaagttcacagatgaccagctg
ctgatgctcacagatctgctagtctccccctgttactacgcttag
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integrated database retrieval system
