Rhinichthys klamathensis goyatoka (western speckled dace): 130088285
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Entry
130088285 CDS
T09701
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04518
Integrin signaling
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130088285 (thbs2a)
04518 Integrin signaling
130088285 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130088285 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130088285 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130088285 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130088285 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130088285 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130088285 (thbs2a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Opsonins
130088285 (thbs2a)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130088285 (thbs2a)
Exosomal proteins of colorectal cancer cells
130088285 (thbs2a)
Exosomal proteins of bladder cancer cells
130088285 (thbs2a)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130088285 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
TSP1_ADAMTS
EGF_3
Laminin_G_3
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
130088285
NCBI-ProteinID:
XP_056110980
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MILRRNLCFLPLLLLCIRALPQDGHVEDESIFDLFKISSISRKTIGAKLFKGHDWDSPAY
RFIRFDHIPAVSTLALHQILKQVQNNEGFVFVATMRQDKSSRGTLIGLEDPSGSRQFEIV
SNGRANTLDLVYMVEGSQNVVSFEDVDLSDSQWKNITLYIHGENAHLYVGCSLIDSVILD
EPFYEHLRPESSQMFVAKGSIRENHFRGLLQNVKFLFDTPIENILRNKGCEIAKPEEVNV
VNESIETVSVSTAISTNFIGQKEKLASDVCERSCEELSNMVHELKGLRIIVGNLIDGLQK
VTEENTVMKEVLGNMKNIKDKRMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPTFLDGECCPVCLPKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCSG
PSIQTRRCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGDGQITRIRHCNSPVPQLGGKDCE
GSGRETQKCEAKPCPMDGAWGPWSPWAICSATCGGGTRTRTRVCNSPRPQYGGKKCPGES
KDTDSCNKQDCPVDGCLSNPCFGGVECTSSPDGSWECGPCPVGFRGNGTFCEDVNECDMV
PDLCFKVVESQRCVNTDPGFHCLPCPPRYKGNQPFGMGVEAAKLNKQVCEQENPCKDKTH
NCHRSSECIYLGHFSDPMFKCECKIGYAGDGLICGEDSDLDGWPNQNLVCGANESYHCKK
DNCPNLPNSGQEDFDKDGQGDACDKDDDNDGIMDEGDNCPLLYNPRQFDYDKDLVGDRCD
NCPYEHNPAQIDTDGNGEGDACSADIDGDEVLNEHDNCPYMYNNDQKDTDMDGVGDQCDN
CPLLHNPDQSDSDNDRVGDECDNNQDIDEDGHQNSLDNCPYIPNANQADHDKDGKGDACD
FDDDNDGIPDDKDNCRLVPNKDQIDSDGDGRGDACKDDFDNDSIPDFLDVCPENDAISIT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNSVDFSGTFYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEH
LRNALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMSDS
GPVYDQTFAGGRLGLFVFSQELVYFSDLKYECRDN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaaatctctgctttctgcccttgctgttactatgcatcagagcacta
cctcaagatggccatgtggaagatgaatccatcttcgaccttttcaaaatcagcagcatc
agcagaaagacgattggtgccaagctcttcaagggccacgactgggactcgccggcatac
cgcttcatccgctttgaccacatccctgctgtgagcaccctggccctccatcagatccta
aagcaggtccagaacaatgagggttttgtgtttgtggccaccatgcgacaggacaagagc
tcaaggggcaccctgattggtctggaggatcccagtgggagccgtcagtttgagattgtg
tccaatggacgcgccaacacgcttgatctggtctacatggtcgagggatctcaaaatgtg
gtgtcctttgaggatgtggacttgtcggattcgcagtggaagaacatcacgctgtacatt
cacggagagaatgctcatctgtacgtaggctgtagcctcattgacagcgtgatcctggac
gagcctttctatgagcacctgcggccggagagcagtcagatgtttgtggctaagggatct
atcagggaaaaccacttcaggggtttgctacagaatgtgaagttcctttttgacacccca
atagagaacatcttgagaaacaaaggttgtgagatcgctaaacctgaggaagttaacgtg
gtaaatgagagtatagagactgtgtctgtcagcacggctatctccaccaacttcattggg
cagaaggagaaactggcatcggacgtgtgcgagcgttcctgtgaggagctcagcaacatg
gtgcatgaactgaaaggtcttcgtatcattgtgggcaatctcatcgatggcttgcagaaa
gtgactgaggagaacactgtgatgaaggaggtgctggggaatatgaagaacatcaaagac
aagcgcatgtgctggcaagacggccgtctctttgaggataaggaggactgggttgtggac
agctgcaccaagtgtacctgtcaggaatcaaagattgtgtgccatcaaatcacatgtcct
ccagtagcctgtgccagccccactttcctagatggcgaatgctgtcctgtgtgtctgcct
aaagacagcgaggacggctggtcaccttggtcagaatggacggagtgtaccgtcacatgt
ggaacaggcacccagcaaagaggcaggtcatgtgatgcaaccagtaacccctgcagcggc
ccctccatccaaacccgcagatgcagcctgggaaaatgcgacagtcgtgtccgacaagac
ggtggttggagtttgtggtccccttggtcatcatgctctgtgacatgtggagatggacag
atcacacgaattcgccactgcaactcccctgtccctcaactggggggaaaggactgtgag
ggcagcgggagagagacgcaaaagtgtgaagccaaaccctgtccgatggatggagcctgg
ggcccgtggtctccttgggcgatctgctccgccacctgtggaggaggaacaaggacacga
acacgcgtctgtaacagccctcgtccgcaatatggtggcaagaaatgccctggagagtcc
aaggacactgattcctgcaacaaacaggactgccctgtggatggttgtctatctaaccca
tgcttcgggggtgttgaatgcaccagctcccctgacggctcgtgggagtgcgggccctgc
cctgtcggtttccgtggcaatggaacattctgtgaggatgtgaatgagtgtgacatggtc
cctgatctgtgtttcaaagtcgttgaatcccagcgctgtgttaacacagacccaggattc
cactgtttgccttgccctcctcgatacaaaggcaatcagccctttggaatgggagtggag
gctgccaagctaaataaacaggtatgtgagcaagaaaacccctgcaaggataaaacccac
aactgccacagatcctctgagtgcatctaccttggccactttagtgacccaatgtttaaa
tgtgagtgtaaaatcggctatgctggggacggtctcatttgcggcgaggactctgacctt
gatggctggcccaatcagaacctggtgtgtggagccaacgaatcctatcactgcaaaaag
gacaattgtcccaaccttccaaactcaggccaagaggactttgataaagacggtcaagga
gacgcctgtgacaaagacgatgataatgatggaatcatggatgagggggacaactgtcct
ctgctgtataatcccaggcaatttgactacgataaagatcttgttggtgatcgctgtgat
aactgcccatatgagcacaaccccgctcagatcgacaccgacggtaatggcgagggagat
gcctgctccgcagacatcgatggagatgaggttttgaatgagcatgataactgcccctac
atgtacaacaatgaccagaaggacacagatatggatggcgtgggtgaccagtgtgataac
tgtcctctgctgcacaaccctgaccagtctgactcagataatgaccgagttggggatgag
tgcgacaacaatcaggacattgatgaggacggccaccagaacagcctggataattgtccc
tacattcccaacgccaaccaggccgaccatgacaaagatgggaaaggagatgcttgtgat
tttgacgacgataatgacggaatccctgatgacaaggacaactgcagactggtgcccaac
aaagatcaaatagactctgatggggatggaagaggtgatgcctgcaaagatgattttgac
aacgacagcattccagactttttggatgtgtgccctgagaacgacgccatcagcatcaca
gacttcaggaagtttcagatggtgcatctggaccccaaaggaacgacacaaattgatccc
aactgggtggtcagacatcaaggcaaagagttggttcagactgccaattctgaccctggt
attgctgtgggtttcgatgagttcaactctgtggatttcagtggcactttctacgtcaac
actgacagagatgacgattacgctgggtttgtgtttggctaccagtccagcgggcgattc
tacgtggtaatgtggaagcagataactcagacgtactgggaagacaaaccttcaaaagcc
tttggcatctcaggggtttctctgaaagtggtcaactctaccacgggcacaggggagcac
ctgcgtaacgccctgtggcacactggtgacactcctggacaggtccgcacactgtggcac
gaccctaaaaatatcggctggaaggattataccgcctacaggtggcatctcatccacaga
cccaagacaggattcatcagagtggtggtttatgaggggaaacagatcatgtcagactca
gggccggtttatgatcaaacctttgcaggagggagattaggactgttcgttttctcccag
gaactggtttacttctctgatctcaagtacgagtgtcgagataactga
DBGET
integrated database retrieval system
