Rhinichthys klamathensis goyatoka (western speckled dace): 130088312
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Entry
130088312 CDS
T09701
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130088312
Pattern recognition receptors [BR:
rkg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130088312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FISNA
FIIND
NLRC4_HD2
PRY
UPA-FIIND
NOD2_WH
LRR_6
CARD
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
130088312
NCBI-ProteinID:
XP_056111003
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MENRESRERSSSPDPSCVSVKSDASMEKPPKLSDEAVTSDPSDEAVTSDPSDEAVTSDPS
DKAVTSDPSDEAVTSDPSDEAVTSDPSDEAVTSDPSDEAVTSDPSDKAVTSDPSDEAVTS
DPSDEAVTSDPSDEAVTSDPRVYRDDQTGDQDSPQPVNDELQRVKHRHKTSMKNKYERLF
EGLNLQENETLLNRIYTQLYIIEGERGGVNEEHEVLQMEKSARTQHSQDTPIHCNDIFKA
SPEPGRQEKQRIKTVLTKGIAGIGKTVSVQKFILDWAEGKDHQDVDFMFVLPFRELNLIR
DHQYSLHTLLLDFHPELQDLDSKMYEECKVVFIFDGLDESRIALMFSDAQDVSDVTETSS
VGVLMSKLMKGDLLPSALIWITSRPAAANQIPSEYIHRLTEIQGFNEPQKEEYFRKRISD
EHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDLSAEIPQTLTEMYIHFLLI
QIHMRNQKYEERDPEKLLQSNREVIVKLAEVAFYQLMKGNVMFYEEDLIESGIDVTDASV
HSGICTEIFKEESVIHQRKVYSFIHLSVQEFLAAFYVFYCYLMKNKEPLQFLRRFRSDED
SLYLRSGEDSLYDLLTSAVDKALRSENGRLDLFLRFLLGVSLESNQRLLQDLLTHTENSS
ESIRRTTQFIKDTIKEERIINPLSADQSINLFLCLLEVKDQTLSREIQEFVKSDKHSVEF
LSPSHCSTISYMLQISEEPLDELNTMKYNTSDEGRRRLIPAVVNCRKALLVGCNLTGQDC
EIVSSALQSSNSVLRELDLSNNDLQDSGVKIISDGLKSPNCQLQILRLSGCMVTEEGCGY
VSSALSSNPSHLRELDLSNNDLQDSGVKIISDGLKSPNCQLQILRLSGCMVTEEGCGYVS
SALSSNPSHLRELDLSYNHPGESRVKLLSDKLKDPNCSLQILNVDHCGEFRITAGLHKYA
CDLTLDPHTAHTRLILSDENRTVTCVEERQSYPDHPERFDRVLQVLCGESLTGRCYWEAE
WSGRDAVKSVSYKGIRRKGGIDCVFGYNDKSWSLFCYNNRFTVLHNRNRTAIPVVCSSSK
RVGVCVDVSAGTLSFYSVSDTHTLTRLHTLYTTFTEPLYAGFGLYDYNSSVSLCDIKQRP
ERNISDTHTPGFSEPKPSGLDIHPLLNCQSCVHIADSDQWLQIEPSACTDEGGSKFRVRT
GPGRYECVRTRMRWVCACVVSLQYRTVDGLFLNAELERLHCNRIAPVMDVTVISGKLEEV
HLPHYACLAESDPSLKDAVKVLTVRDEGITTEPVQLTRFHAKIVQPSFSLITLIISWIMG
WDEHCDLLLYMRSQDPLILHLYLFPFDECEKERVKKKEKNNYLIEHPRPGRPLRMRTFHM
LDVSGAAAIHPREGITLTREIPPNFFKVKTRLENDLQMTLIREEDQKTVWTATIEKDELD
LIRPQRNEPRLNSEADKARYFDNHWSDLIQGVTNVQIIADNLCQWKLIHRETYSEITQSV
TSQESMRKICDIISKHSDAVKAKLISVLQQEKLYHF
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagagagagcagagagagatcttcatctccagatcccagctgtgtgtctgtg
aagagtgacgcatccatggagaagcctcctaaactcagtgatgaagcagtgacctctgac
cccagtgatgaagcagtgacctctgaccccagtgatgaagcagtgacctctgaccccagt
gataaagcagtgacctctgaccccagtgatgaagcagtgacctctgaccccagtgatgaa
gcagtgacctctgaccccagtgatgaagcagtgacctctgaccccagtgatgaagcagtg
acctctgaccccagtgataaagcagtgacctctgaccccagtgatgaagcagtgacctct
gaccccagtgatgaagcagtgacctctgaccccagtgatgaagcagtgacctctgacccc
agagtttatagagatgatcagactggagaccaggattctcctcagccagtgaatgatgaa
ctacagagagtcaaacacagacacaaaaccagcatgaagaacaagtatgagagattattt
gagggactgaatctccaagagaatgaaaccctcctgaacaggatctacacacagctctac
atcatagagggagagagaggaggagtgaatgaagaacatgaggttttacagatggagaaa
tcagccagaacacaacactcacaagacactccaatccactgcaatgacatctttaaagcc
tctcctgaaccaggacgccaggagaaacagcggatcaagactgttcttactaaaggcatc
gctggaatcgggaaaaccgtctctgtgcagaagttcattctggactgggccgaggggaaa
gaccatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacctgatccga
gatcatcagtacagtcttcacacacttctgctggactttcatcctgaacttcaagatctg
gactcaaagatgtatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagc
agaatcgcactgatgttttcagacgcccaggacgtttctgatgtgactgagacttcatca
gtgggtgtgttgatgtcaaagctcatgaaaggagatctgcttccctcggctctcatctgg
atcacctccagaccagcagcagccaatcagatcccctccgaatacatccaccgtctgaca
gagattcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatcagtgac
gagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatg
tgccacatacccgtcttctgctggatctcctccactgtgctccagaagctcctggaagaa
gatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgatt
cagatccacatgaggaatcagaagtatgaagagagagatccagagaaactcctgcagtcc
aacagagaagtgattgtgaaacttgctgaagtggctttctatcagctgatgaagggcaat
gtgatgttctatgaggaggacctgattgagagcggcatagacgtcactgacgcctcagtc
cattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagaggaaagtc
tacagcttcattcatctgagcgttcaggagtttctcgctgctttctatgtgttttactgc
tatttaatgaagaacaaggaaccactgcagtttctgcgtagattcagatctgatgaagac
tctctgtatctcagatctggtgaagactctctgtatgatctactaacatcagcagtagat
aaagccctcaggagtgagaatggacggctggatctgttcctgcggttcctgctgggcgtc
tcactggagtccaatcagagactcttacaggatctactgacacacacagagaacagctca
gagagcatcaggagaaccacacagttcattaaagacacgatcaaagaagagcggataatt
aatcctctctcagcggatcaatccatcaatctgttcctctgtctgctggaagtgaaagat
cagactctgtccagagagattcaggagtttgtgaaatcagacaaacactcagtggagttt
ctctctccgtctcactgctcaacaatctcctacatgcttcagatctcagaggagccgctg
gatgagctgaacaccatgaaatacaacacatcagatgagggcagaagaagactgatacca
gctgtggtcaactgcagaaaagctcttctggttggctgtaatctcactggtcaggattgt
gaaattgtgtcatcagctctacaatcctcaaactctgttctgagagagctggatctgagt
aacaatgacctgcaggattcaggagtgaagattatttctgatggactgaaaagcccaaac
tgtcagctgcagatactgaggttgtctggctgtatggtgacagaggaaggctgtggttat
gtgtcttcagctctgagttcaaacccatcacacctgagagagctggatctgagtaacaat
gacctgcaggattcaggagtgaagattatttctgatggactgaaaagcccaaactgtcag
ctgcagatactgaggttgtctggctgtatggtgacagaggaaggctgtggttatgtgtct
tcagctctgagttcaaacccatcacacctgagagagctggatctgagctacaatcaccca
ggagaatcaagagtcaagctgctctctgacaaactgaaggatccaaactgctcactgcag
atactcaatgtggatcattgtggagagttcaggattacagcaggattacacaaatacgcc
tgtgatctcacactggatccacacacagcacacactcgactcattctgtctgatgagaac
aggacagtgacgtgtgtggaagagcgtcagtcgtatcctgatcatccagagagatttgat
agagttcttcaggttctgtgtggagagagtctgactggacgctgttactgggaggctgaa
tggagcgggagagatgctgttaaatcagtgtcatataaaggaatcaggaggaaaggaggg
atagactgtgtgtttggatacaatgataaatcctggagtctgttctgctataataacaga
ttcactgtccttcacaatcgtaataggactgctattcccgtcgtctgttcatcctctaag
agagtaggagtgtgtgtggacgtgtcggccggcactctgtccttctacagcgtctctgac
acacacacactcacacgcttacacacactctacaccacattcactgaacccctctatgct
ggatttgggctttatgattataactcttcagtgtctctgtgtgacattaaacagcgtcct
gagagaaacatcagtgacacacacacacccgggttctctgagcccaaaccttctgggctg
gatattcacccgctgctgaactgccagtcttgtgtccatatagctgattctgatcagtgg
cttcagattgagccgtcggcctgtacagatgaaggagggtcaaagttcagggtccgcact
ggcccaggccgttacgagtgtgtcaggaccagaatgcgatgggtctgtgcctgtgtcgtc
agccttcagtaccggaccgtagacggactcttcctcaacgcagagctggagaggctgcac
tgcaaccggatcgctccagtgatggacgtgacggtgatctcagggaaactggaggaagtt
catctgccccattacgcctgtttagcagagtctgacccctctctcaaagatgctgtgaaa
gtgctcaccgtaagagacgagggaataaccacagaacctgtgcagttgacccgattccat
gccaagattgtccagccatccttctctcttataacattgattataagttggataatggga
tgggacgaacactgcgatcttcttctctacatgcgttctcaagatcctctcattctacat
ctctacctttttccatttgatgagtgtgaaaaagaaagagttaagaagaaagaaaagaac
aattacctaatagagcatcccagacctggcaggccactccggatgagaacgttccacatg
cttgatgtttctggtgccgccgctatccatcccagagaagggatcacactcacaagagaa
attcccccaaacttcttcaaggtcaagactcgtctggagaatgatcttcaaatgactctc
atcagagaagaggatcagaagaccgtctggactgcaacgattgagaaagatgaactcgat
ctgattcgtcctcagagaaacgagccgcgtctgaatagtgaggcagataaagcaagatat
tttgataatcattggtcagatctcattcagggcgttactaatgtccagatcattgcagat
aacctgtgtcagtggaaactaattcatagggaaacatattcagaaatcacacagagtgta
accagtcaggagagcatgagaaagatctgtgacattataagcaaacacagtgatgctgtg
aaagctaaactcatctcagttcttcagcaagagaagctttaccacttttga
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integrated database retrieval system
