Rhinichthys klamathensis goyatoka (western speckled dace): 130088406
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Entry
130088406 CDS
T09701
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
rkg04517
IgSF CAM signaling
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130088406 (pard6a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130088406 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
130088406 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130088406 (pard6a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130088406 (pard6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130088406
NCBI-ProteinID:
XP_056111114
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MSRHQRTPLKNEESVVEVKSKFEAEYRRFALKKKGAGGFQEFYQLLQTIHRIPGVDVLLG
YADIHGDLLPINNDDNFHKALSSANPLLRIIIQKRDVDDSVPFPAGSLQRRKKGLAGLRQ
AQQSKSKPALLISNPQDFRQISSIIDVDILPDTHLRVRLHKHGTHKPLGFYIRDGVSVRV
TPQGVEKVPGVFISRLVKGGLAESTGLLGVNDEILEVNGIDVAGKSLDQVTDMMVANSHN
LIVTVKPANQRNNTMHRASKTSAGNSSAGSGGSALSHDSAPSPASQNASQYSNSNSVAEG
DSDDDTDLIIENDNLYVPHRMTNGNGSHGNALSSGAFAHRPLPQSVSLPSSSSLSSLTTP
THNGSPTKTSSSQESMREDGNFITL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcatcaaaggacgccgttgaaaaacgaggagagtgtggtggaggtgaagagc
aaatttgaggcggagtaccgaaggtttgccctgaagaagaagggagctgggggcttccag
gaattctaccaactgcttcaaaccattcacagaatccccggagtggacgtgctgctggga
tatgccgacatccacggagatcttcttccaattaacaatgatgacaacttccacaaagca
ctgtcctcagcaaatccgctgcttcgaattatcattcaaaaaagagacgtagacgactcc
gtgccgttccccgcaggctctctccagagaaggaaaaagggcctagctggtctgcgtcaa
gcgcaacagtccaagtccaagccggcgctgctcatcagcaatccccaggatttccggcag
atctcttctatcatcgatgtggacatcttacccgacacgcatctccgtgtccgtctgcac
aagcacggcacccacaaacccctcggcttttacatccgtgatggcgtcagtgtccgcgtc
actcctcaaggggtggagaaagttccgggcgtcttcatctcccgcctcgtgaaaggcggt
ttggcagagagcacgggtttgctgggagtcaatgacgagattctcgaggtgaatggtatc
gatgtggccgggaaatcactggaccaggtcaccgacatgatggtggctaacagccacaac
ctcatcgtgacggtaaaacccgccaatcagcgcaacaacacgatgcaccgtgcgagtaaa
acatctgccggcaatagttccgctggctcgggaggctccgccctctcacatgactccgcc
cccagccccgcctcacagaacgccagccaatacagcaacagcaacagtgtggccgagggc
gacagtgacgatgatacggacctcatcatcgagaacgacaacctgtacgtgccacaccgt
atgactaatggcaacggcagccacggtaacgccctgtcgtcgggtgcatttgcgcacagg
cccctcccacaaagtgtttccttgcccagtagcagctctttaagctctctgaccacacct
acacacaacggcagtcccaccaagacgagcagtagccaagaaagcatgagagaggacgga
aacttcattacgttgtga
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