Rhinichthys klamathensis goyatoka (western speckled dace): 130088413
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Entry
130088413 CDS
T09701
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130088413 (ctcf)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130088413 (ctcf)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130088413 (ctcf)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130088413 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
130088413
NCBI-ProteinID:
XP_056111144
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAGLEQVQIEGQPVVEAQQQ
LVESVVNVNSSVEMMVMDSLDPALLQMKTEVMEAAVGAPVGVAGAAHEATVTTVDDTQII
TLQVVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATVMPKDGDPVICHTLP
LPEGFQVVKVGANGEVETVEQDELHAQEDQPPQQEEEEMGEAQNEDPAWSKDPDYTPPVK
KAKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKG
VKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRP
HKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQC
SLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH
CDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCD
YACRQERHMVMHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCG
KTFTRRNTMARHAENCTGVDSADGENGTPPKRARGGRKRKMRSRKDDDDDDSDEHGEPDL
DDIDEEEEDELLDDEQMDVEQAPPSVPIPAPAEPPVKRKRGRPPKNAPKPSPTKSVAKTT
TAAAIIQVEDESTGAIENIIVKKEPEGSDAAVTAQPVVEEVEAVEAGVETVQLAVPEAAP
NGDLTPEMILSMMDR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgactgaggcggtggtggaagatgcaggggatgctttcaaggccaag
gaatgtaagacctaccaaaggcggcgtgaagatgaggaagtgggagctgaattgttgcag
gctgctgggttagagcaagtccagattgaaggacagcctgtggtggaggcccagcaacag
ttggtcgagagtgtagttaatgtcaacagcagtgtggagatgatggtgatggactccctg
gaccctgccctactccagatgaagaccgaagtcatggaggctgctgtcggagcacctgtt
ggtgtggctggtgctgcccatgaagccacagtcacaactgtcgatgacactcagatcatc
accctgcaggtggtgaacatggaggagcagcagttgggcttgggagagcttcagctagtg
caggtgcctgtttctgctgtcccggtcactgctgccactgtggaagagctgcaagggaca
ctggttgatgccactgtcatgcctaaagatggggatccagtcatctgtcacaccctgcca
ttgcctgagggcttccaggtggtcaaggtgggtgcaaatggagaagtggaaactgtggag
caagacgagctccatgcccaagaggatcagcctccacagcaggaggaggaggagatgggt
gaagcccaaaatgaagaccccgcgtggtccaaagatccagattacacgccccctgttaaa
aaggctaagaagactaagaaaagcaagctgcgctacaacacggagggcgataaagacatg
gacgtgtctgtgtatgactttgaggaggagcaacaggagggactgctttctgaagtcaat
gctgagaaagttgtgggtaatatgaaaccacctaaaccaaccaaaatcaagaagaaaggt
gttaagaagacattccagtgtgagctgtgcagttacacctgccctcgccgttccaatctg
gatcgccacatgaagagccacacggatgagaggcctcacaagtgccatctttgtggacga
gccttcaggactgtgacattgctgaggaaccatctcaacacccacacaggcaccagacca
cataagtgcactgactgtgacatggccttcgtcaccagtggagagctggtgcgacacaga
cgctacaagcacactcatgagaaaccattcaagtgctccatgtgtgactatgctagtgta
gaggttagcaagctgaagcggcacattcgctcccacacgggagaacgtccgttccagtgc
agtctgtgcagctatgctagcagagatacctataagctgaagagacatatgaggacccac
tcgggagagaagccctatgagtgctatatctgtcatgcacgttttacccagagtggtacc
atgaagatgcacattctgcagaagcacacagaaaatgtggcaaaatttcactgccctcac
tgtgacacagttattgctcgcaagagcgatctcggtgtgcacctccgtaagcagcattcc
tacattgagcagggcagaaagtgtcgttactgtgatgcggtgttccatgagcgctatgct
ctcatccagcatcagaagtcccacaaaaatgagaaacgtttcaagtgtgaccagtgtgac
tatgcgtgccgtcaggagcgtcacatggtaatgcacaagcgcacccatactggggagaag
ccatacgcctgcagccaatgtgagaagactttcagacagaaacagctcctggatatgcac
tttcggcgctatcatgatcccaactttgtacccacatcctttgtttgcaccaaatgtggc
aagaccttcactcgcaggaataccatggccagacatgcagagaactgcactggtgtggat
tctgctgatggagagaacggaactccacccaaaagggctcgtggtggccgaaagaggaag
atgcgctctagaaaggacgatgacgacgatgatagcgatgagcatggagaacctgacctt
gatgacattgatgaagaggaagaggatgagcttctcgacgatgaacagatggatgtggaa
caggctccacccagcgttcccatccccgcaccagctgaacctcccgttaagaggaaacgg
ggcagaccccccaagaatgcacccaagccctctcctacaaagtctgtcgccaaaaccacc
acagctgctgccattatccaggtggaggatgaaagcacaggggccattgagaacatcatt
gtgaagaaggagcctgagggctctgatgctgctgtaactgcccagccagtggtggaggaa
gtggaggcagtcgaggctggtgtagaaacagtgcagctagctgtccctgaagctgcacct
aacggtgatcttactcctgaaatgatccttagcatgatggaccggtga
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integrated database retrieval system
