Rhinichthys klamathensis goyatoka (western speckled dace): 130088449
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Entry
130088449 CDS
T09701
Symbol
nbr1b
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130088449 (nbr1b)
04137 Mitophagy - animal
130088449 (nbr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130088449 (nbr1b)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130088449 (nbr1b)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
130088449 (nbr1b)
Pexophagy
Other pexophagy associated proteins
130088449 (nbr1b)
Aggrephagy
Cargo receptors
130088449 (nbr1b)
Xenophagy
130088449 (nbr1b)
Other autophagy associated proteins
Midbophagy
130088449 (nbr1b)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
130088449 (nbr1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
130088449
NCBI-ProteinID:
XP_056111175
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MDFYINLKVNFRGNAKSFLLSGSETKSWESMEAMVKRSFGLCNLQLTYFDEENEEVSINS
QLEYEEALKSAARQGNRLQMNVYETRGSRATVPGPGPPPGSGVGLGQVKPGTVGEPKKGF
RPPQHCPTLAQVVSRKIQAAVPEEGLVIVNELKGGKAEDKTPPAWFTSYMEKFKDQVVRE
AVEKICREFSGQCCIHKPVGPEAQVPEVTSSTLPGAPSSAPACSSCRGQTAGGGYQCSVC
TSCTLCEPCSFSHDPSHNLVRARTPLSIPEHGSPAPDHSRFYRRGDRSFRKAEKQRLKAE
KRQLKAEVKEIRKQLRMERRGLQWSTAGEGSSSPVLLQPRATQANSPDRPKRPCPLAVPA
MTALLLDENLPDGSRLRPGTKFIKYWKMKNSGRVCWDSETKLKFMWGNLAVGSGERWREV
AVPTLQPGQVGVVSVALCAPTLEGTYTSHWRLAHRGEQFGPRVWCSIVVDPHAPTAICAD
GLLVSPCVTPQEKSSRTLEREEKCRASRDQLVLSVNQDCDQEFYIPSVDLLTAQDLLSFE
LLDINIVQELESVPNNTPADITPCISPLPHDGPLQEKPTLGLIQEETEAQGVSSILDVAQ
GTELEGVPAQEKGQESITGPQFVSPSVIRSLTLEVAEHGTLCGRFPAKVVRPAPQGSMSL
CERKSEKVPETGNLLMSAPAPLKVETSRVSSSASPQTETAGTAAPLLTLPTDLISTDEGH
ESDIEQILVEPAGGDLVEEGEEEVDKKEQVKATEAAKETRSRTSSASSEDYIIILPDCFD
TTRPLGESMYSSALSQPGEEPAEGDKLESVETAELQSAVAAAVSVDANDMLCASQTLDAV
PLTPVIVVAPRPFVKSCTETQVQTDNGAEEQEGSDTTEPGDKETDSEPNQPDPENSLASA
KSETEELRANSITGGLVKGALSVAASAYKALFTGQAGSEKLPEDAASHDAMMAVLVEMGF
GDRALNQRLLQKHNRNLLDVVNELVQMTDNDWYTTRY
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggacttctatatcaatctgaaggtgaatttccgagggaatgcgaagagtttcttgctg
tctggctcagagacgaagagttgggagtctatggaggccatggtgaagaggtcatttggc
ctgtgtaatttacaactgacttattttgatgaggaaaatgaagaggtatcaatcaacagc
caattggaatatgaagaagccctgaagagtgcagcacgacaggggaacagattacaaatg
aatgtgtatgagacaaggggcagtagagccacagttccagggccgggccccccaccaggg
tcaggggtgggcttgggccaggtgaaacctggtactgttggagaacccaagaagggattc
aggcctcctcagcactgccctactttggcacaagtggtgagtcgcaaaattcaggcagca
gtcccagaggaaggattggtaattgtaaatgaactcaaaggtgggaaagcagaggataag
acacctccagcttggttcacttcatacatggaaaagtttaaggaccaggtggttagggag
gcagtagagaagatttgtagggagttctctggacaatgctgcatccataagccagtggga
ccagaagctcaggttcctgaggtcacctcatccactctgcctggggccccaagttcagct
ccagcctgcagcagctgccggggccagaccgcaggcggcggataccaatgcagtgtgtgt
acctcctgcactctgtgtgagccttgtagcttctcacatgatccaagccacaaccttgtg
agagccagaactcccctgtctattcctgagcacggctccccagcgccagaccacagcagg
ttctacagaaggggtgaccggagctttcgcaaggccgagaagcagcgtctcaaagcggag
aagcgtcagctcaaggcggaggtgaaggagatcaggaagcagctgaggatggagaggaga
gggctgcagtggagcactgctggagaagggagctcttcacccgtcctgctgcagccacgt
gccacacaggcaaacagcccagatcgtcctaaacgtccatgcccgctggctgtgccagct
atgacagctctgctcctggatgaaaacctgcctgatggatcacgtctgcgtcctgggacc
aagttcattaaatactggaaaatgaagaacagtggcagagtgtgctgggactctgagacc
aagttgaagttcatgtggggaaacctggcagtgggctcaggcgaaagatggcgggaggtc
gcagtgcccactctacagccaggtcaggtgggtgtggtcagcgtggctctttgtgctccg
acattggagggcacctacacgtcccattggcgcctggcacacagaggagagcagtttggg
ccgcgtgtttggtgcagcatcgttgtggatccacatgcacctacagccatctgtgctgac
gggctgctggtgtctccctgtgtcacccctcaggagaagtcttcccgcactcttgagagg
gaggagaaatgccgggcttcaagggatcaattagttttgtccgtgaaccaggactgtgat
caggaattctacattccatctgtggatttactcacagctcaggacttactgtcttttgaa
ctgctggacatcaacattgtgcaggagctggagagcgtgcccaacaacactcctgcagac
attactccttgcatatcgcctttgccccatgatggacctcttcaggagaaaccaacattg
gggctgatccaagaagaaacagaagcccaaggagtcagcagcatcctggatgtggctcag
gggacagagttagagggagtcccagcacaagagaaaggacaggagagcatcactgggcct
cagtttgtcagtccatctgttattcgctctctcacccttgaagtggcagagcatgggacc
ctgtgtgggagattcccagctaaagtggtgcgcccagccccccaaggttcaatgtcactt
tgtgagaggaaatcagaaaaagttccagaaacaggaaacctgttaatgtctgctccagcc
ccactgaaagtagagacgtcacgagtctccagctctgcttcaccacagacagagaccgct
gggacggctgctcccctgctgacgcttccaacagatctcattagcacagatgagggtcac
gagtctgacatcgagcagatcctggtggaacctgcaggtggagatctggtagaggaggga
gaggaggaagtggataagaaagagcaagttaaagcgacagaagcagctaaggaaactcgc
agcagaacttcctctgcatcttcagaagactacatcatcatcctccctgattgctttgac
accacccgtccactaggagagtccatgtacagctcagccctgtcgcagcctggagaagag
cctgcagagggagacaaactagaatcagtggagaccgcagagcttcagagcgccgttgct
gctgctgttagcgtggatgctaatgacatgctctgtgcctcccagactctggacgctgtg
ccgctcacccctgtgattgtagtggcaccccggccctttgtcaaatcctgcacagagaca
caagtgcagacagataatggagcagaggagcaggaggggagtgatactacggagccagga
gataaggagacagattctgagcctaatcaacctgaccctgagaactcattagcatctgcc
aagtctgaaacagaagagctcagggccaatagcatcactggtggattggtgaagggtgcc
ctgtccgtggcagcatctgcctataaagctcttttcactggtcaggctgggtctgagaag
ctgccagaagatgcagcttctcatgacgccatgatggctgtgctggtagagatgggcttt
ggtgaccgagcactaaatcaacgtctgctgcagaaacacaaccgaaacctgctggatgtg
gtaaacgaactggtgcagatgaccgacaatgactggtacacgacacgctattaa
DBGET
integrated database retrieval system
