Rhinichthys klamathensis goyatoka (western speckled dace): 130088593
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Entry
130088593 CDS
T09701
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130088593 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130088593 (gspt1)
03012 Translation factors [BR:
rkg03012
]
130088593 (gspt1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130088593 (gspt1)
Translation factors [BR:
rkg03012
]
Eukaryotic type
Release factors
130088593 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
130088593
NCBI-ProteinID:
XP_056111397
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDSRDIAPDSWEQEDDVEATADTELQSAFTGLNVNAPIFVPSFLSQGPAENDTSDGTDAV
ASMEISEPVAAVENGETDASAVETWEQKRERDEEEPGGGSPDDTECCRDEEQDEMMMEED
EEMPTPKLPPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAK
EKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAS
QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWSLDRY
EECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKETSELCPWYTGLPFIPHLDSLPNF
TRPTDGPIRLAIVDKYKDMGTVVLGKLESGCIGKAQQLIMMPNRNTVEVLSLLSDDVETE
YASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVL
HIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQM
GRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacatagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtctgccttcaccgggctcaacgttaacgctccgatattcgta
ccatcctttctttcccaaggtccagcggaaaacgatacgtctgatggcactgatgcagtg
gcaagcatggagatctcagaaccagtggctgcagtggagaacggagagacagatgccagc
gcagtggagacgtgggagcagaagcgggagcgggatgaggaggaaccaggaggtggatcc
ccggatgacactgaatgctgtagggatgaggaacaggatgaaatgatgatggaggaggat
gaagagatgccgacccccaagctgcctcctcctctaccagatgcccctaagaaagagcat
gtgaatgttgtgttcattggacatgtggatgcaggcaagtctacaattggtggacagatt
atgtatctaactggtatggtggacaaaagaacgctggagaaatatgaacgggaggcaaaa
gagaagaacagagagacttggtatctttcctgggctctagacacaaaccaagaggaaaga
gacaaggggaaaacagtagaagttggaagagcctactttgagactgagaaaaagcacttt
actattcttgacgcaccgggccataaaagctttgtgcccaacatgattgggggggcatcc
caagctgatttggcagtgctggtcatctctgccaggaagggtgagtttgagaccggtttt
gaaaagggaggtcagacgagggagcatgccatgctggccaaaacagctggagtcaaacat
ctgatagtcctcgtcaacaaaatggacgatcccactgtgaactggagtttggatagatac
gaggaatgtaaagagaagttagtgccatttctgaagaaagtgggctttaatccaaagaaa
gacattcacttcatgccctgctccggaatgacaggagccaacctgaaagaaacttctgag
ttgtgcccgtggtacacgggattgcctttcattccacatctggacagcctgccaaacttc
accagaccaactgatggtcccatcagattggctattgtggataaatacaaggacatgggc
accgtggtgcttggaaaactggagtctgggtgtatcgggaaagcacaacaacttattatg
atgccaaatcggaacacggtggaggtgttgagtcttctctctgatgatgtggagacggag
tacgcctcgcctggtgaaaacctgaagctccggctcaaaggcatcgaggaggaagagatt
ctcccaggatttatcctatgcaatgctgagaacctctgtcactcagggcgcacttttgat
gcccagattgtcattattgaacacaaatccattatatgcccaggttacaatgcagtacta
cacatacatacctgcatagaagaagtgcagataacagcgttaatctgtctggtggacaag
aaaacaggagaaaagagcaagactcgcccacgcttcgtcaaacaagaccaagtatgcatc
gcccgtcttagggctgcaggaacaatctgcttagagacttttaaagacttccctcagatg
ggacgtttcaccttgagagatgagggtaagacaatcgcaattggcaaggtgctgaagctg
gtacctgagaaggactaa
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