Rhinichthys klamathensis goyatoka (western speckled dace): 130088612
Help
Entry
130088612 CDS
T09701
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130088612 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130088612 (rangap1b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130088612 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_4
LRR_NLRC4
CDC45
Motif
Other DBs
NCBI-GeneID:
130088612
NCBI-ProteinID:
XP_056111427
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MTVFIVGILIIWNAMASGDIAQITEALAKTHVGEVELSYKGRGLKLDNAESVKEMVKEIE
QCQGLQSLRLEGNTLGVEAAQAISKALEAKSELEQCHWSDMFTGRLRSEIPPALKSLGNA
LMTSGARLIQLDLSDNAFGPDGVKGIESLLKSPVCYTLRELRLNNCGMGIGGGMVLASAL
TECYKQSSAAGSPLKLKVFIAGRNRLENNGTTALAKAFKVLGSLEEVHMPQNGINHPGIT
ALAAAMKHNPNLQVLNLNDNTFTKRGSIAMAEGIRFLRCLKVINFGDCLVRSEGAIAIAG
ALREGLPFLRELNLSFGEICEAAALVVAKAVQGKADLEKLDLNGNCFGEDGCEALREAME
SMNMEELLGSLSDDEGEPDEDDGEPDEDDDDEEDDDEDEEEEEGGKENGVNGTKDIIEEK
EEPHCSSEFTSFLISPSAEKLISFGAKRIQLIEQVDVSDASKVSEVFLKTSSVYEDEPEV
KQAVFETTDALLRKAFSNSHSQSSSLIFSLIVNLGLLKSEDKKIKKVSVLPGHLLALEHA
AAQEFFPVDQAGILEAFVSRNGKVLESCSSARDALKTTLVKRTTA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttcatcgtcggtattctaattatatggaacgcaatggcctctggagatatt
gctcagattacggaggctctggccaagactcatgttggagaagtggaattaagttataag
ggacgagggctaaagttggacaatgctgagtcggtgaaagagatggtgaaagagattgaa
cagtgtcagggtttgcagtccctcagattagagggaaacacactgggggttgaagcagca
caggccatttccaaggctcttgaagctaaaagtgaattggagcaatgtcattggagtgac
atgttcacgggtcgccttcgctctgaaattccacctgctctgaaatcattgggcaatgct
ttgatgacatcaggggccagactgattcagctggacttgagcgacaatgccttcggccct
gatggtgtaaagggaattgaaagcctcctgaagagccctgtgtgctacaccttacgtgag
ctcaggcttaataattgtggcatgggcattggaggggggatggtcctggcttctgcattg
actgaatgctacaagcaatctagtgcagctggctcccccctgaagttaaaagtcttcata
gctggacgtaatcgtctggagaataatggtaccactgcacttgccaaagcatttaaggtg
ttaggcagtcttgaggaggtccatatgccacagaacggaatcaaccatcctggtatcacg
gctttagccgctgccatgaagcataacccaaacctccaggtcctcaacctcaatgacaac
acttttactaagagaggatcgatagccatggcagagggcattaggttcctccgttgtctt
aaggtcatcaattttggggactgtctggtacgctcagaaggtgctattgctatagcaggg
gcccttagagagggactgccattcctcagggagctgaatttgtcatttggagagatttgc
gaagctgcggctttggtagttgcaaaggctgttcagggcaaagctgatctggagaaactg
gaccttaatggaaactgctttggagaggacggctgtgaggctctcagggaagcgatggag
agcatgaacatggaagagctgctgggctcgctcagtgatgatgaaggagagcctgatgaa
gatgatggagagcctgatgaagatgatgatgatgaggaggatgatgatgaggatgaggag
gaggaggagggggggaaggaaaatggtgtcaatggaacaaaagatatcattgaagaaaag
gaagagcctcactgcagttctgagtttacatccttcctcatctccccgtcggctgagaaa
ctgatatcctttggagccaaaaggatccagctcattgagcaggttgatgtttcagatgct
agtaaggtgtcagaagtttttctcaagacctcctccgtatatgaagatgaaccggaagta
aagcaagctgtttttgagaccactgatgccctgttgaggaaagccttttccaactcccac
tctcagtcttctagtttgatcttttcactgatagtgaacctgggacttttaaagagtgaa
gataaaaagataaagaaggtatctgtactgcctggacacttgctcgctttggagcacgca
gctgcacaggagtttttcccagtggatcaggctggcattctggaagcattcgtgtcacga
aatggcaaagtcttagaatcctgctccagtgccagagatgctctcaagaccacattggtg
aaaaggaccactgcttaa
DBGET
integrated database retrieval system
