Rhinichthys klamathensis goyatoka (western speckled dace): 130088634
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Entry
130088634 CDS
T09701
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130088634 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130088634 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130088634 (snf8)
Membrane trafficking [BR:
rkg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130088634 (snf8)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130088634 (snf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
Sigma70_r1_1
SelB-wing_3
DUF4896
Motif
Other DBs
NCBI-GeneID:
130088634
NCBI-ProteinID:
XP_056111472
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGNVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWERERACHVLDHLLKEGLAWLDSQAAVEPQYWLPALF
AELFLQDVTPEEASQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagtcggagctggagcgatcgccaagaagaaactggcagaggcaaag
tataaagagagaggtaatgtcctggctgaggatcagattgcacagatgtcaaaacaattg
gaaacctttaagacccatttggaggagtttgccagcaagcataaacaagaaatccgtaaa
aactctcaattcagggtgcagttccaagagatgtgtgccaccataggggttgatccactt
gcctcaggaaaaggattttggtctgagatgcttggagttggagatttctactatgagctt
ggtgtacagatcattgaagtttgtttagctttaaaacacagaaatggtggtctcatcaca
ttggaggaacttcaccaccgtgtcttgaaaggaagagggaagtttgctcaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggccatgggaaatggcttcgggatg
attccagttggaggttcttatctagtccagtcggtcccagcagagctcaacatggatcac
actgttgtccttcagctagcagagaaaaagggctatgtgacagtgagcgagatcagagac
agcctcaagtgggagagagagcgggcctgtcacgttcttgatcacctgctgaaagaaggc
ttagcgtggctggactcccaagctgcagtggagccacagtactggctgccagctctgttc
gcagaactgtttttgcaagacgttacgcctgaggaggccagccaaatgacaccttga
DBGET
integrated database retrieval system
