Rhinichthys klamathensis goyatoka (western speckled dace): 130088676
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Entry
130088676 CDS
T09701
Symbol
psme4b
Name
(RefSeq) proteasome activator complex subunit 4B isoform X1
KO
K06699
proteasome activator subunit 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130088676 (psme4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rkg03051
]
130088676 (psme4b)
Proteasome [BR:
rkg03051
]
Eukaryotic proteasome
Regulatory particles
PA200
130088676 (psme4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
GyrB_insert
Motif
Other DBs
NCBI-GeneID:
130088676
NCBI-ProteinID:
XP_056111552
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MKKEQAEILGFVPQKEIVYNKLLPYADKLDRESNDILAQIKGNLGRAVQFRELWPGVLFW
TRKLSTYLRLYGRKFSKEDHVLFIKLLYELVTIPNLEISMMQSFARLLINLLKKKELLSR
DDLELPWRPLYDLYESILYSKTEHLGLNWFPNYRAEASTKQKMLSIVRKRSVENVLKTLV
KSCRLYFPESATQEMLDEWRPLLCPFDVTMQKAIGYFELFLPTIMSPEQHHKGFKLWFDE
LMDLWVSVQNLPAWEGNLVNLFARLANDNIGYVNWDPYIPKIFTRILRSFNLPVGTSQMV
VPRYLTNSYDIGHVVLWISSMLGGLQNQAQKQLNGLFSSIASFYHPSNNGRWLMKLMKLL
QRLPASVVRRLHRERYKKPCWITPVPTSHRLTDQDVTDFVESMKQPVLMAMFSKTGSMDA
AQALQNLALMRPELVIPPVLEKTYPAMETLTEPHQLTATLSCMIGMARSLLSGGRHYPEG
PAHVLPLLMRALPGVDPNDFSKCMITFQFIATFTTLVPLVDCSSALHEKNDLTEMERELC
SASAEFEDFVLQFMDRCFALIDSSTLEQTREETETEKMTHLESLVELGLSSTFSTILTQC
SMEIFKVALEKVFNFATTNIFETRVAGRMVADMCRASAKCHPAESLRLFVPHCCNAITHL
TANEDVLNEEELDKELLWSLQLLSEVTRVDGEKLLPYRTQLVQTLQLTLRMRCKQGYTLA
CNLLHHILRSTALTYPTDYCSVPGGFNKPLQEYLPIKDWGRPGDLWHLEIQWHVPSAEET
AFVFYVLDLLLQPELQRLQRYAQGEQDMSRDDVLQSLCIVQHCLLGAGSMLPPLDGTIVT
GLVPSLLSLEETKLYIGVDYDKSRENYREAICKVMRQLLHYILERSEDDTKSLFAIIKII
SDLMHFKGSHKHEFDSRWKSFTLVKKSMENRLHGKKQHIRALLIDRVLLQHEMRKLLVEG
CEYKSVHQDLLRDLLRLSTSTYSQVRSKAQNVLFTALGTYNFCCRDITPRVLELLEPTRT
DVTQQQFKGALYCLLGNHSGVCLANLHDWDCISQTWPAIVRSGLSSAMSLEKPSIVRLFD
DLADKVHRQYETIGIDFTVPESAVFLGRSITDSRQPTPYIGTPVDQELEQGLALQQDKNQ
DAEQKYEKLLKDLLECLNDRDLPWKFEHIAIGFLSLLLRDDYPLPAPAVLFFIRSLNHDA
LVVRKMAIAAVAGILKQLKRPRKKIPVTPCDISSVTEPEGLVAGDRPGNDWLQYHGDSLP
KTQQDWDNFCFVEKTHWGYYCWPKKLMLYAPEAEQPKDLAAENMNERERIIYDHFTDPVF
IKQLIEFLSLEDRKGKDKFNPRRFCLFKGLFRNYSDAFLPVLKPHMERLADDSHESTQRC
VAEIIAGLVRGSKHWSFGKVEALWTFLIPLMRTALSKITVETYADWGTCVATACESRDPR
KLHWLLEMLMECPLSGEGGSFVDACHLYVLQGGLAQQEWRVPELLHRLLSYLEPKLTQVY
KNVRERIGSVLTYIFMIDVNLPCTLPTKSPHIAEFTERILSQLKPLIEGDEEIQNHVVEE
NGVGEQDERTQAIKLFKTVLKWLMASAGRSFSTPVPQQLQLLPLLFKIAPVENDDSYDEL
KRDAKTCLSLVSQGLLYPQQIPLVLKVLHEIAGSSSWHARFSVLTYLQIMVFYNLFTILS
TEQAVQDVRTLVIRLLEDEQLEVREMAATTLSGFLQCNFLAMDASMQTHFEALCKTRLPK
KRKRDLGSVVDTIPSVDLVRRHAGVLGLSACILSSPYDVPTWMPQLLMDLSAHLNDTQPI
EMTVKKTLSNFRRTHHDNWLEHKQQFTDDQLVVLTDLLVSPCYYA
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggagcaggccgagatattaggttttgtccctcaaaaagagatcgtctacaac
aaacttctcccgtacgcagataaactagaccgcgaatccaatgatattttggcccagatt
aaagggaacttgggtcgggctgtccagttccgtgagttatggccaggagttttattttgg
acccggaaactatccacgtaccttcggctgtacggaaggaagttcagcaaggaggaccat
gtgctcttcatcaagcttctgtacgagctggtcaccatccccaacctggagatcagcatg
atgcagagctttgcacgactccttatcaacttactgaaaaagaaagaactgctgtcccgg
gatgatttggagttgccttggaggcctttgtacgatctctatgagagtatcctgtactcc
aaaacagagcatcttggtcttaactggttcccaaattatcgagcagaagcctcaactaaa
caaaaaatgcttagtattgtgcggaagcgctcggttgagaatgtgttgaagacactagta
aagagctgcagactttatttccctgagtctgccacacaggagatgcttgatgagtggcga
ccgttactgtgtccgtttgatgtcactatgcagaaggccatcgggtactttgagctcttc
ttgcccaccatcatgtccccagaacagcatcacaaaggcttcaagttatggtttgatgaa
ctgatggatctctgggtctcagtgcaaaacctgcccgcttgggagggtaatctagtgaat
ctttttgcacgtctggctaatgacaacattggctatgtgaactgggatccatacattccc
aagatctttaccaggatcctacgtagctttaatctgcctgttggcaccagccaaatggtc
gttcccagatacttgaccaactcctatgatatcggtcacgtggtcctctggatttcctcc
atgctgggcggcctacagaaccaggcccagaaacagcttaatgggctcttcagtagtata
gcatccttctaccacccttcaaataacggacgctggctgatgaagctaatgaagcttcta
cagcgtctgcctgccagtgtggttcgacgtctacatcgggagcgctataagaaaccctgc
tggatcacccctgttcccaccagtcacagactcactgaccaggatgtgacggactttgtg
gagagcatgaagcagccggttctgatggccatgttcagcaagacgggcagcatggacgca
gctcaggccctgcagaacctcgctctgatgagaccagagctggtcatcccacctgtgctg
gagaagacgtatcctgctatggagacactgacggagccgcaccagcttactgccactctc
agctgcatgattggcatggcccgcagtcttctcagtggaggccgacattatcccgaaggt
cctgcgcacgtcttgcccctgctaatgagagcactacctggtgttgaccctaatgacttc
agcaaatgcatgatcacgttccagttcattgctactttcactactctagtgcctttagtg
gactgttcatcagccctccatgagaagaatgacttgacagagatggagagagagttgtgt
tcggcttctgctgagtttgaagactttgttctgcagtttatggacaggtgttttgcattg
attgacagcagcactctggagcagacgcgcgaggagacggagacagagaaaatgactcat
ttagagagtctggtggagctgggcctttcatccactttcagcaccattctgacacagtgc
tccatggagatattcaaggttgctcttgagaaagtcttcaattttgccaccaccaacatc
tttgagactcgtgtcgcaggcaggatggtggcagacatgtgcagagcatctgctaagtgt
caccctgctgagtctctcaggctgtttgtaccacactgctgtaacgccattactcatcta
actgccaatgaagatgttttgaatgaggaagaactggataaagaactgctctggagcctt
cagctgctgtctgaggtgactcgtgtggatggggaaaagctcctcccgtaccgcacacag
ctggttcagactctgcagctgaccctgcgcatgcgctgtaaacagggctacactctggcc
tgcaacctgctgcaccatatcctgcgttccacagcgctcacctaccccacagactactgc
agtgtgcccggcggcttcaacaaacccctgcaagagtacttgcccatcaaggactggggt
cgtccaggggatctgtggcatctggagatccagtggcacgtgcccagcgcagaggagaca
gcatttgtgttctatgttctggacctgttgctgcagcccgagctccagcgcctgcagaga
tatgcacagggagaacaggacatgagcagagatgatgttcttcagagcctgtgtatagtc
cagcactgtttgctgggtgctggcagcatgctgccccctcttgatggaaccatagtcaca
ggccttgttcccagcctgcttagtttggaggaaacaaagctgtacattggtgttgactat
gataagtccagagagaactaccgtgaggccatctgtaaagtgatgagacagttgcttcat
tacattctggagcgctcagaggatgacaccaaatcccttttcgccattatcaagatcatc
agtgacttaatgcacttcaaaggttcccacaaacacgagtttgactctcgttggaagagt
ttcaccctggtgaagaagtctatggagaataggcttcatgggaagaaacagcacatccga
gctcttctgattgacagagttcttcttcagcatgagatgcgaaagttgttggtcgagggg
tgtgaatacaagagtgtccatcaggacctgttgagggaccttttgcgtctttctaccagc
acctacagccaggtccgcagcaaggcccagaatgtgttgttcacagctttgggcacctat
aacttctgctgcagagacattactcctcgtgtcctggagctactggagcccacacgaact
gatgtcacccagcaacagttcaagggagcgttgtactgcttgcttgggaaccatagtgga
gtgtgccttgctaacttgcatgactgggactgcatcagtcagacatggccggccatagtg
cgttcaggcctcagctcagctatgtccctagagaagccgtccatcgtcagactcttcgat
gacctcgcagacaaagtccaccgacagtacgaaaccatcggcatcgattttactgtacct
gagagtgcggtttttcttggccggagcatcaccgattcaaggcaacccactccatacatt
gggactcccgtagaccaggagctggagcaagggctggcacttcaacaagacaaaaaccag
gatgcagagcagaaatatgaaaagcttttgaaagatctgttggaatgtctaaatgacagg
gatctgccttggaagtttgagcacattgctattggcttcctgtctctactgctaagagat
gactatcctctcccggctcctgcggtgctcttctttatacggagcctcaaccacgatgcg
ctagttgttcgcaagatggcgattgccgctgtggcaggcatactgaaacagctgaagaga
ccacgcaagaaaatacctgttactccttgtgatataagtagtgtaaccgagccggagggg
ctggtggcaggagacaggccggggaacgactggctgcagtaccatggtgacagcctgccg
aaaacccagcaggactgggacaatttctgctttgtagaaaagacacactggggatactac
tgctggccaaagaagttgatgctatatgcccctgaagcagagcagcctaaggatcttgct
gctgagaacatgaatgagagggaacgcatcatctatgaccatttcacagacccagtgttt
atcaaacagctcatcgagttcctgtcccttgaggacagaaagggcaaagacaagttcaat
cctcgtcgcttctgtctcttcaagggacttttccggaactacagtgatgccttcctgcct
gttctaaagcctcatatggagcggctggcagatgactctcatgagagcacccagcgctgt
gtggctgagatcatcgcaggcctggttagaggcagcaagcactggagctttggcaaggtg
gaggcattatggacattccttattcctttgatgcgaacagcactgtccaagattactgtt
gagacctacgctgactggggtacctgtgtggccactgcctgtgagagccgagatccacga
aagctccactggcttctcgagatgctgatggagtgtcctctcagcggggaaggtggatca
tttgtagatgcctgccacctgtatgtgctgcagggtggtctggcacagcaggagtggagg
gtcccagagctgctacacagattgcttagttacctggagcccaaactcactcaggtttat
aagaatgtgagagagcgcatcggcagtgtgctgacgtacattttcatgattgatgtcaac
ctgccgtgtactctgcctactaagtccccacacatcgctgagtttaccgaaaggatcttg
tctcagctgaagcccctgattgagggggacgaagagattcagaaccacgtggtggaagag
aacggagtgggagagcaggacgagaggacccaggccattaaactcttcaaaacagttctg
aagtggctgatggccagtgcggggcgctccttctctacaccagtacctcagcaactacag
ctgctgcccctgctttttaagatcgctcccgtagaaaacgatgacagctatgatgagctg
aagagagatgcaaagacgtgtctgtctctcgtgtctcagggtctcctctatcctcagcag
atccctctggtactgaaggtgctacatgagatcgctggcagcagctcttggcatgcacga
ttctcagtgctaacatacctccagataatggtgttctataatctgttcaccatactgagc
accgagcaggctgttcaggatgtaagaacactggtcatcaggctactggaggatgagcag
ctggaggtgagagagatggctgccaccactctcagcggcttcctgcagtgtaacttcttg
gcaatggatgcctccatgcagactcactttgaggctctatgcaaaaccagattgcccaaa
aagaggaaaagagacttgggctctgtggtggataccattccttcagttgatctggtgcgg
cgtcacgctggagtgctgggactcagcgcttgcatcctatccagcccgtatgatgtcccg
acctggatgcctcagctcctcatggacctcagcgctcacctcaacgacacgcagccgatc
gagatgactgtgaaaaagactctgtctaatttccgccgcactcatcacgacaactggctg
gagcacaagcagcagttcacggacgaccagctcgtggtgctcacagaccttctcgtgtca
ccttgctactatgcatag
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integrated database retrieval system
