Rhinichthys klamathensis goyatoka (western speckled dace): 130088679
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Entry
130088679 CDS
T09701
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130088679 (chd2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130088679 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130088679
NCBI-ProteinID:
XP_056111561
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MMKNKSKKQDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSDRARSRRSESNSTSDS
ESHFESGSESTGSKSRQNSTQVKDKPVRKKDNLADVKKMWEEHPDIYGVRRSSRSRQEPA
RLNIGAEGSSDSEGESPKRKSPRQKKKENTWKDDDSKDEEDVEEEASSSESEQEEKKVRS
RRLPARRPQTKSSAGKQQSQKGRKQRKQESSEEEDDDDDDDDDDDEEEEDTPKRQTRRRA
ATKVSYKEDQNDFETDSDDLIEMEGAEEQQDDDSETIEKVLETKIGKKGATGASTTLYAI
EENGNPGADFDPEKEEGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGIKKLENFKKKND
ELNAWLSKASLEDLEYYNCQQELTNDLSKQFQILERVIATRTGKSQAHSDLPSHKTSSTE
PEYLCKWMGLPYAECTWEDGGLIRKKFEACVESFLHRNACKTIPSKDCKVLKQRPRFLPL
KKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQH
QLYGPFIVVVPLSTLTSWQREFETWAPDMNVVVYLGDVTSRKTIRDYEWIHQQTKRIKFN
ALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQ
NSLKELWSLLHFLMPDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLP
AKVEQILRVDMSAQQKQFYKWILTRNFKALSKGNRGSSSGFLNIVMELKKCCNHGFLIKH
PEDSENDKVQEHLQCLVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYLAMK
RYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN
PQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTV
LDNNSANSNSNPFNKEELTAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRESDQG
SSATDELLSQFKVANFTMDESTPDLEERAVRDWDDIIPEDQRKKAEEEQKQKEMEDIYML
PRSRSSNKRAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKRRGRPRARKNNVEGFT
DAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNSCVTAVQEHEEHL
KENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKSVPPNPAERSKFQLTCRV
KTPHFDVDWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPDKKPQGKQLQM
RGDYLLKMLKKEQESQDAVKAGDEIKTKKRKPRKKNKAPTNDLVNENASPRLSDNPSEEG
EVKDDGAEKSPTKKKQKKDNKENKEKTGTTKKEKEADKDKKRSKSKKEKAKPGGKGKKAQ
GPVHITAGSDPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQHTR
TCLLKIGDRITECLKTYNDPEHVKIWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRSQEE
EKEQKKKDDPSRKKPFRPEPSGSSRDSTGAQPTTKPHPQPGPPPHSHHRDQYNHPNKRHF
PNDDRGDWQRDRKYSYPGNSSQPWQGDRHHPYESHRYKDHHYGDRRPHGDYRSSGGYRNS
SSPRKRAYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGHPQDFRRMPDH
RSPPGNHGPMGPDHYRPFHPDKPPPLIDPRSPQSQKSPLEPISPALERTAEQKPVTDFNW
NNRKT
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagagtaaaaagcaggatgaaggctcaactcaaagcaatgcttccagc
aattcagcatcagaggaatctaaccgctctggatcagagtctgggagtcagtcggagagc
gagcagggaagcgatagagctcgttcccggcgttccgagtccaacagcacctccgattcc
gagagccactttgagtcagggagtgaatccactgggtccaaatcccgtcagaactcaaca
caggtcaaagacaaaccagtcaggaaaaaagacaacctggcagacgtgaagaagatgtgg
gaggaacatccagatatttatggtgttagaagatccagtcgcagcagacaagagcctgcc
cgcctcaacattggagctgagggcagcagtgattcagagggggaaagtcccaaaagaaaa
agcccacggcagaaaaagaaagaaaatacctggaaagatgatgactcaaaagacgaagag
gatgttgaggaagaggccagcagttcagagagtgagcaggaagagaaaaaagttagatcc
agacgacttcccgctagaagaccacagaccaaatcatctgctggcaagcagcagtcgcaa
aagggacggaaacagaggaagcaggaatcctcagaggaggaggatgatgatgatgacgat
gatgatgatgatgatgaagaagaggaggataccccaaaaagacaaacaaggcggcgagca
gcaactaaagtcagttacaaggaggaccagaatgatttcgagacggactctgatgacctt
atcgaaatggaaggagccgaggagcaacaggatgacgacagtgagaccatcgagaaggtc
cttgaaaccaagattggcaagaaaggagctactggagcttccacaaccctctatgctatt
gaggaaaatgggaaccctggagcagactttgatcctgagaaagaggaaggggaaactcag
ttcctgatcaagtggaaaggctggtcctacatccacaacacctgggagagcgtggactcc
ctcactcagcagaaagtcaaagggattaagaagctggaaaacttcaagaagaaaaacgat
gagcttaacgcttggttgagcaaagcatcactggaagatttagaatattacaattgccag
caagaactaaccaatgacctgagcaagcaattccagatattagagagagtgatcgcaaca
agaacagggaaatcacaagcacattcagatttaccctcccataaaacctcttccactgag
ccggagtacctgtgtaagtggatggggctgccgtatgcagagtgcacatgggaggatgga
ggattaatcagaaagaaatttgaggcctgcgttgagagtttcctacacagaaatgcttgc
aagacaatcccttccaaagactgcaaggtgttgaaacagaggccaagatttctgcccttg
aagaagcagccttcttacattggagatgaaaaccttgaactcagagattaccagttagat
ggagtgaactggctggcccactcctggtgcaggtgtaacagtgttatcttggctgatgaa
atgggcctgggaaagaccattcagacgatctccttcctgtcctacctttttcatcagcac
cagctttatggtcccttcatcgtggtggtgcccctgtcaacccttacctcctggcagagg
gagtttgagacttgggccccggatatgaacgtagtggtgtacctaggagacgtcacaagt
agaaagacgatccgggactacgaatggatccaccagcagacaaaaaggatcaagttcaat
gcacttttgaccacatatgaaattctactgaaggacaagggagtgctggggaatataaac
tgggctttcctcggagttgatgaagctcaccggcttaagaatgacgactcgctgctatat
aaaactctgatcgactttcggtccaatcacaggctgctcattactgggaccccacttcag
aactcactcaaagagctgtggtcccttctgcactttcttatgcctgacaagtttgagtcc
tgggaggattttgaggatgagcatggtaaaggcagggataatggttatcagagcctacat
aaagttctggaacctttcctactgcgtcgtgtcaagaaagacgtggagaaatccttgccg
gctaaagtggagcaaatcctcagagtcgacatgtctgcccagcaaaaacagttctacaaa
tggatactaacaagaaacttcaaagccttgtccaaaggcaacagaggcagctcttctggc
tttctcaacatcgtcatggagctgaagaagtgttgtaatcatggtttcctcatcaaacat
ccagaggatagtgagaatgataaagtacaagagcacctacagtgcttggtgcgtggcagc
gggaaactggttctcctggacaagcttctcacacgactgagggagagaggcaaccgcgtg
ctcatcttctctcagatggtccgcatgttggacatccttgctgattacctggctatgaaa
cgatatccgttccagcgtttggacggctccatcaagggagaaattcgaaaacaagcactg
gaccactttaatgcagaaggctctgaggacttctgtttcctgctgtccacccgagctgga
gggcttgggattaacctggcctcagccgacacagtggttatctttgactcggactggaac
ccacagaatgatcttcaagcccaggccagagcccacaggattggccagaaaaagcaagta
aatatctaccgtctggtcacaaaaggcactgtggaggaagacattattgaaagagcgaaa
aagaagatggttctagaccatcttgtcattcagagaatggacacaactgggcgaaccgta
ctggataacaactcggcaaattcaaattcaaaccccttcaataaagaagaactgacagca
atcttgaagtttggagcagaggatctgttcaaggaacctgagggagaggaatcagaacca
caggaaatggacattgatgagatcttgcggcttgctgaaaccagagagagtgatcaggga
tctagtgccaccgatgagcttctgtcacagtttaaggtggctaactttacaatggatgaa
agcacaccagatcttgaggagagggctgtgcgtgactgggatgatataattccagaggat
cagcggaaaaaggcggaggaagaacagaagcagaaggagatggaagacatctacatgctg
cctagaagcagaagctccaacaagagggcgcaggctaatgacagcgacagtgacgtggga
tctaaactgaagcacagatcctcgggttcagatagtgaaacggatgacagcgaggatgac
aaacgaccaaagcggagaggcaggccgagagctcgcaaaaacaatgtggagggatttact
gacgcagagatccgcaggttcattaaggcatacaagaagtttggagctccgcttgagagg
ttggaggcgattgcccgtgactctgagctggtggataagtccatcgcagacctgaagcga
ctgggggaactggtacacaacagctgtgtgactgcagtacaggagcatgaggagcacttg
aaagaaaaccctgtggaagctaaagggccaggaaaaagacgaggcattaacataaagatc
tctggagttcaggtcaatgcgaagtccattatccagcacgaagaggagtttgaaccgctg
cataaatctgtgcctccaaatcctgctgaaaggagcaaatttcagctgacctgtcgggtg
aagactccgcactttgacgtagactgggatattcatgatgacacacagctgttattgggc
atctacgagcatggctacggcaactgggacctgatcaagaccgaccctgatctcaaactt
tctgagaagattctcctagatgaccctgataagaagcctcagggaaagcagttgcagatg
cgaggagactacttgcttaagatgctgaagaaagagcaggaaagccaagatgctgttaaa
gcaggagatgagatcaaaaccaaaaagaggaaacctcgaaagaagaacaaggcccctacc
aatgatctggtcaatgaaaatgcctctcctcgtctttccgacaacccatcagaagaggga
gaggtcaaggatgatggagctgaaaaatcacccacaaagaagaaacagaaaaaggataac
aaagaaaacaaagaaaaaacaggaactactaaaaaagaaaaggaggcggacaaagacaaa
aagcgctccaagtccaaaaaagagaaggccaaaccaggaggaaaaggaaagaaagctcag
ggccccgtgcacattactgcaggaagtgatcctgtaccaattggagaggaagatgatgaa
ctggaccaggaaacatttagcatttgcaaagagcggatgaggccggtaaagaaggctctg
aagcagttggataagccagacgaggggctgtcggtgcaggagcagttacagcacactcgt
acctgcctgttgaagatcggagaccgcatcacagagtgccttaaaacgtacaatgaccct
gagcacgtcaagatctggcgcagaaacctctggatttttgtgtccaaatttaccgagttt
ggcgcccggaaactgcacaagctgtataagatggctcagaagaagcgctcgcaggaggaa
gagaaagagcaaaagaagaaggatgatccttccaggaaaaaacccttcagacctgaaccg
tctggatctagtcgagactctacaggtgcccagcccacaacaaaaccccatcctcagcct
ggacctccccctcactcccaccacagagatcaatacaaccatcccaacaaaaggcacttt
cctaatgatgataggggagattggcaaagagaccgtaaatacagctacccaggtaacagc
agtcagccctggcaaggggatcggcatcacccatatgagagtcacaggtacaaggaccac
cactatggcgaccgtcgtcctcatggtgactaccgcagctcaggaggttaccgtaacagc
agttcccctcgcaaacgagcctatgaccagtatggcaacgatagagatcatcggggccat
cgagactattatgacagacatcctgaccctaagaggaggcgttcggatgagtaccgctcc
ccgaactaccaccaagggggaggggggcatccacaggacttcagaaggatgcctgaccac
aggagcccccctggaaaccatggccccatggggcctgatcactaccgccccttccaccca
gacaaacccccacccctgattgacccccgttcccctcagtctcagaaatccccccttgag
ccgatctcacctgctttggaaagaactgcagagcagaaacctgtgacggactttaattgg
aacaacaggaagacgtga
DBGET
integrated database retrieval system
