Rhinichthys klamathensis goyatoka (western speckled dace): 130088680
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Entry
130088680 CDS
T09701
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130088680 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130088680 (nrxn1a)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130088680 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Motif
Other DBs
NCBI-GeneID:
130088680
NCBI-ProteinID:
XP_056111557
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIR
INCTTSKGPETIFAGQNLNDNEWHTVRVVRRGKSLKLMVDDLQPSEGQITGDHTQLEFHN
VETGIVTEKRYMPAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADP
VTFKSRSSYVTLPTLQAYYSMHLFFQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHYVS
DLGNGAHLIKGNSNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLDLKGDL
FVGGVAKEMYKDLPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEGEENG
PSTTCQEDSCSNQGVCLQQWEGFSCDCSMTSFGGPLCNDPGTTYIFGRDGGLIVYTWPPN
DRPSTRADRLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIEKGNIRVVFNVGTDDINIEE
TSKFVNDGKYHIVRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVV
DEWLLDKGRQLTIFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPNVRVE
GSARLVGDMPSSSITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDLLVAS
AECPSDDEDIDPCDPSSAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILILLY
AMYKYRNRDEGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDKEYYV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccagttgccagtagtgatgcacacagaggcagaagacgtgtcgctgcgcttc
cgttcccagcgtgcctatggtgttctcatggcaaccacctcccgaaactcagctgacact
ctgaggctggagctggacggaggacgtgtccgactcactgtcaatctagactgtatcagg
ataaactgtactaccagtaaaggtccagagaccatatttgcgggccagaacttgaatgac
aacgaatggcacacggttcgtgtcgtcagaagaggcaaaagtctgaagctaatggtggat
gacctgcagccatctgaaggtcaaatcacgggggaccacacgcagctggagttccacaat
gtggagacgggcatcgttacagagaagcggtacatgcccgccgtgccctccaacttcatt
ggacacctgcagggtctgtccttcaatggcatgtcctacattgacctgtgcaagaacggc
gacattgactactgcgaattgaacgccatgatcggctacaggagcatcgtggcagatccg
gttaccttcaagtctcgttctagctatgtgaccttgcccactctgcaggcctattactcc
atgcacttgtttttccagtttaagaccacttcaccagatgggctcgtcctgtacaaccga
ggagatggcaatgactttatagttgtagagctggtgaaaggatatctccattatgtgtca
gacctgggaaatggagctcatctcatcaagggaaattccaacacacctctgaatgacaat
cactggcacaatgtgatgatctcaagagacacaaacaaccttcacactgttaaaatagac
actaaaatcaccacacagactaccatgggagccaagaacctggatctgaaaggtgatttg
tttgtgggaggtgtggccaaagagatgtataaggacttgccaaagctggtgcattcgaaa
gaaggcttccagggctgcttggcatctgtggacctgaacggccgtttgccagacctgctg
tcagacgcactgtccaacgccggccaggtggagagaggatgcgaaggtgaggaaaacggg
cccagcactacctgtcaagaggattcctgctccaatcagggtgtgtgtctgcagcagtgg
gagggcttcagttgcgactgcagcatgacatcatttggaggaccgctctgcaatgacccg
ggaaccacatacatattcggacgtgatggagggctcattgtgtacacatggccgcccaac
gacagaccgagcacacgagctgaccgactggctgtcgggtttagcactcagcagaaggat
gcagtcctggttagggtggacagctcttctggcctgggagactacctgcagcttcagatt
gaaaaaggcaatatcagagtggtgttcaatgtgggcaccgatgacataaacattgaagaa
acctcaaagtttgtaaatgatggaaagtaccacatagttcgctttacgagaagtggtggt
aacgccaccttgcaggtggatgatctgccagtcattgagcgctacccaacaggcaacatt
gataacgaacgcctggcgattgctagacagcgaatcccatatcggcttggtcgagtagtt
gacgaatggctactcgacaaaggtcggcagctcaccatcttcaacagtcagaccaccata
aagattggaggctgggagaagggcagtcggcccttccagggccagctctcagggctttac
tacaatggcctaaaagtgcttaacatggctgccgagggcgaccccaacgtgcgtgtggag
ggtagcgcccggctggtgggagatatgccctcctcttctattacgccccagtccagcgcc
tccgcaacgggcaaccgctcagaaacgtcgccctccatcaccgacatcaccactacaact
gcatccaaccgccagggcaagcagacgacaactccacaggatgatcttctggtagcgtcg
gcagaatgtcccagtgacgatgaggacatcgacccttgcgacccaagttcagctcaccct
ccgctgcccgaggccaagggttaccctagcccggaggtgattcgggagtccagcagcacc
actggcatggttgtaggcatcgtcgcggccgctgccctctgcattctaatcctgctctat
gccatgtacaaataccgaaaccgcgacgagggctcataccacgtggacgagagccgtaac
tatattagtaattctgccacgcagcccaacggagccgctgtcaaagaaaagcccattggc
gtgcccaaaaataaaaaagataaaaagaacaaggacaaggagtactacgtctga
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