Rhinichthys klamathensis goyatoka (western speckled dace): 130088713
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Entry
130088713 CDS
T09701
Symbol
opn4b
Name
(RefSeq) opsin 4b isoform X1
KO
K04255
r-opsin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rkg04030
]
130088713 (opn4b)
G protein-coupled receptors [BR:
rkg04030
]
Rhodopsin family
Vision
Opsin
130088713 (opn4b)
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
CBM_11
7tm_4
Motif
Other DBs
NCBI-GeneID:
130088713
NCBI-ProteinID:
XP_056111614
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MNASRSVSMGIPTQVPNSIAVSADTLAPLNYSAVSAHKLMELPALTTTVAMVQDVRHLFP
TVDVPDHAHYTIGSVILAVGITGMVGNFLVMYAFCKSRSLRTPANMFIINLAVTDFLMCV
TQTPIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGV
MSRKRALLILFAAWVYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFT
FVFFIPLFVIIYCYFFIFRAIRDTNRAVGKINGEGGFRDSIKKIHRMQNEWKMAKIALIV
ILLYVISWSPYSCVALTAFAGYADILTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAI
AKYIPCLGVLLCVPRRDRFMSSSFMSTRRSTVTSQSSETSSNMHRAGKARLSSVSDSESG
WTDTEADLSSVSSRPASRQVSSDIRKDLSDIKHTSSLRLKVKSRDSGIFDRTSAQSLTEP
SVNRTSAYISTAGDKEEISMAEVSLSSCLSSSPNMVSDNVDEKRLLVRIPSIIVTSESSP
ALLSVGRSSGSSRQLPGASVEEASFSVDPASID
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttcgcgctcggtcagcatgggaatccccactcaagtccctaacagcatcgcg
gtgagtgcggacacactggctccgttgaattacagcgcagtgagtgcgcacaagctgatg
gagctgcccgcgctaaccactacggtggcaatggtgcaggatgttcgacatcttttcccc
actgtggatgtcccagaccacgctcactacaccatcggctctgtcattctggcagtgggc
atcaccggcatggtgggaaacttcttggtcatgtatgccttctgcaagagtaggagtctg
aggacacctgccaacatgttcatcattaatctggctgtcactgactttctgatgtgtgtc
actcagacaccaatcttcttcaccaccagtttgcacaagcgatggatctttggggaaaaa
ggctgtgagttatatgcattctgcggcgctctgtttggtatctgctcaatgatcacgctc
atggttattgcggtagatcgatacttcgtgatcactcgtcctttggcctcgattggcgtt
atgtcacgcaaacgagccctgttgatactcttcgctgcttgggtgtactctatgggctgg
agcctgcccccattctttggatggagtgcgtatgttcctgaaggtttgctaacatcctgt
tcgtgggactacatgaccttcagtccttcagtacgtgcctacacaatgctgctctttaca
tttgtattcttcatccccctcttcgtcatcatttattgctacttcttcatcttcagggct
atccgtgataccaacagagctgtgggaaaaatcaatggagaaggaggattcagagactct
atcaagaagatccatcgaatgcaaaatgaatggaagatggcaaagatagcgcttatagtg
atcctgctgtatgtcatctcttggtctccatactcatgtgtagctcttactgcttttgct
ggatacgctgacattctcacaccatacatgaactctgtgcctgctgtgattgccaaagca
tccgccatacacaacccaatcatctatgccatcactcaccccaagtacaggtctgccatt
gcaaagtacataccatgtctgggagtgctgctgtgtgtacctcgtagagaccggtttatg
agcagtagctttatgtccacacgacgctccactgtgactagccagtcttctgagaccagc
agcaacatgcaccgtgccgggaaggcacgcttgtcgtcggtgtctgacagcgagtcgggc
tggacggacacagaggcagatctctccagcgtgagttcacggcctgctagccgtcaggtc
tcatctgacatccggaaagatttgtcagatatcaagcacaccagctctctgaggctgaag
gtcaagagcagagactctggtatcttcgacagaacctcagctcagagtctaactgagccg
agcgtgaaccggaccagtgcatacatcagtacggcaggcgacaaagaagagatctccatg
gctgaggtcagcctgtccagttgtctctcgtcctctccaaatatggtctcagacaatgtt
gatgagaaaagactgttggttcggatcccttccatcattgtaacgtcagagtccagtcca
gccctcctctcagtagggcgcagcagtggctcctccagacagctcccaggtgcttcggtg
gaggaagcctctttctctgtggaccctgctagcattgactga
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