Rhinichthys klamathensis goyatoka (western speckled dace): 130088728
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Entry
130088728 CDS
T09701
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130088728 (zeb1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130088728 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
DUF6801
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
130088728
NCBI-ProteinID:
XP_056111647
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGAADPDGRWDDVKEECVSDEDERSRDALVEEMLQQGDTAVIYPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARSINGMFQGGASAPLQGAVQAV
VLPTLVSPISINLGDLQNMLKVAVDGNVIRQVLESTQAKGQQAGTGIVGAGGLGIAQASQ
QVIQAISLPILDQDGNAKIIINYSLDPSQAQALLQNPKKEPLGLNTEVCKAQKLPEDLTV
KTNRDKTTITVDEKSMLHNDTTLKHCGKDGHRVNGKNLDGKMDLEEGLCPGQPPLKNLLS
LLKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISIDPSSPLAEDEQTTPG
DLDGTKGGSPRTEPDDQMNSEEQGERECSSPVEDIAAGVNGIESVPTSPSPLNLSADGPV
PARTLEEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKKELLSNASTNAAI
FASQPSANPINIVTTQLPTLVAITDQGQAQCLRALATTKQTILIPQLTYSYTTTSSSPAG
ADTPQKNVIHVNGIKEEKQEMGSEVTSTLEEQTDSDSGPTRKKMKRTESGLYACDLCDKI
FQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHS
GSYSQHMNHRYSYCKKEAQGQGLGQGVEEEDNHGEEQPRTGSAAASPPSHLDSDERGSST
REDESEEEDEIGSGSLVDEDEIQVVKIGEEGDEDDQGADEEQEGGEGERMEEAEQEEGES
EENDGQMLKVVVMQDECEEEENGEEGRTAEEAMDTGAPEHTKDTTERDEERENPADNEKN
SENEENTAATNGGVK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactacagtcatgtgctggagggccagtcagactcagatgatgaagataagcttcac
attgtggaggaggaagggagtcttctggatggggctgactgtgacagcgtggcccctgac
gatgaccccaatggggccgccgacccggacggcagatgggatgatgtgaaagaggagtgc
gtgtcagacgaggatgagaggagcagagatgctttggttgaggagatgctccagcaagga
gacacggcagtcatctaccccgaggctccagacgacgaaccgcgtcagggcacaccagaa
accagtggacatgatgaaaatggcacgccagactcattttctcagcttctcacctgtccg
tattgctctcgtggctacaagcgttacacctcactgaaggagcacattaaatacagacac
gagaagagcgaggacaacttcagctgctctctctgtagttacacctttgcctaccgaaca
cagctggacagacacatgaccgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaagaagcgtttctctcattccggctcctacagttcccacatcagcagtaagaag
tgcatcggcctcatctcagtaaacgggcggccacgaccttctcccgcgaccggggctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccctacagcacgtgtccaa
gtcagagacaaactggacaacagcaaaccccttcaggagcagcttcccttgacgcagatc
aagtctgagccgctggactacgagtacaagcctgtggtggtggccccatctgctagaagc
ataaatggcatgttccagggtggggcgtcagcccctctccagggtgccgtccaggctgtt
gtgctcccaacactggtatccccaatcagcatcaacctgggggacttacagaatatgctg
aaggtagcagtggatggcaacgtcatcaggcaagtgctggaaagcacgcaagctaaaggg
cagcaagcagggacaggaattgttggagcaggagggttgggaattgcccaagcatcccag
caagtcatccaggccattagtcttcccatcttggatcaggatggcaatgctaagatcatc
atcaactacagtctagacccgtcacaggcccaagcactccttcaaaatccgaagaaggaa
cctttggggttgaacacggaggtctgcaaggctcagaagctgccagaggacctgactgtg
aagacaaatagggacaaaaccaccatcactgtggatgaaaagagtatgttacacaatgac
acaacacttaagcactgtggtaaagatggacatagggtaaacgggaaaaatcttgatggg
aagatggacttggaggaaggactgtgtcctggtcagcctcctctgaagaaccttctctcc
ttgcttaaggcttactttgccttaaacaatgagcccaccaaggaggagctggcaaagata
tccgagtctgtcagtcttccagcagaggtggtaaagaagtggtttgagaagatgcagctg
ggacagatctccatagacccctcctcacccctggctgaagacgagcagaccacccctggg
gatttggatgggactaaaggtggatcacccagaacagagccggatgatcaaatgaactca
gaggagcaaggggagagggaatgcagtagtccagtagaggacatagcagctggggtgaat
gggatcgagagtgtccctacatccccttcaccactaaacctatcggccgatggtcctgtc
ccagccaggactcttgaggaaggcgaaggacctctcgatctgtcgctaccaaaatccgct
gctacagctgctgtggctagcggtcacgttaacactgtttactcggctcaagaggagccg
ctgaatttgacttgcacaaagaaggaactgctcagcaatgcaagcaccaatgctgccata
tttgccagccaaccaagtgccaatcccataaacattgtgaccactcaactgcccacccta
gtggctatcactgaccagggacaagcacaatgtctacgtgcacttgccaccactaaacag
accatcttgatcccacagctgacttacagttacaccactacatcctccagcccagcaggg
gccgacacaccacagaagaacgtgatacacgtcaatggcattaaggaggagaaacaggag
atggggtcagaggtcacctcaacattggaagaacagacagactcagactcagggccgacg
aggaagaagatgaaaaggacagagagtgggctgtacgcctgtgacctgtgtgacaaaatc
ttccagaagagcagctcattgctccgccataaatacgaacacacaggaaagaggcctcat
gaatgtgggatctgcagcaaggccttcaaacacaagcaccacctaatagagcacctgcgc
ctgcactccggagaaaagccgtaccagtgtgacaagtgcggcaaacgcttctcccactcc
ggctcctactcgcaacacatgaaccacagatactcctactgtaagaaagaggctcaaggt
caagggctaggccaaggggtcgaggaagaggacaaccacggcgaggagcagcctcggacg
ggaagcgcggcggcctcacccccttcccacctggactcggacgagcgggggagtagtacc
agagaggatgagagtgaggaggaggatgagataggctctgggagcttagtggatgaggat
gagattcaggtggtcaagattggagaagagggagacgaagacgaccagggagcagatgaa
gagcaggaagggggggagggagagaggatggaggaggcggaacaagaagaaggtgagagc
gaggaaaatgacggacagatgctgaaagttgtagtgatgcaggatgaatgtgaagaggaa
gaaaatggggaagaggggcgaacggcggaggaagccatggacacaggagcccctgaacac
acgaaggacacgacagaaagagacgaggaaagagagaacccggcggacaatgagaaaaac
agtgaaaatgaagaaaacacagccgctacgaatggaggcgtgaaatga
DBGET
integrated database retrieval system
