Rhinichthys klamathensis goyatoka (western speckled dace): 130088825
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Entry
130088825 CDS
T09701
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04010
MAPK signaling pathway
rkg04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130088825 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130088825 (rasgrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
Uso1_p115_head
IQ
PH_11
MYO6_lever
DUF641
Motif
Other DBs
NCBI-GeneID:
130088825
NCBI-ProteinID:
XP_056111783
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFESESSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQYYFTVSFNHENQKAVELRTEDVKDCDEW
VAAISHASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
MLKDNEKIQSNPTTAPSDDDSEIKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPISEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVMSLIDCTLIEEPEGTDEESKSDK
SGQDMEHLDFKIVVEPKDSQSFTIILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTSAEVVLDKLITIYKRPISAIPARSLELFFASSQNNKLLYGEPPKSPRAS
RKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSPNGYASMYSSMSPFSK
TTLDINKLYVSSPVSSKIPDESEGKTDKTDEVSPCKQDGSVREENDNDPIQSDEAEAEVS
PTKSPTTPKNVKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFESNTELKM
KVISFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQICLEEVLQMAEGGKSEPFENH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMKTTKHFNDISNLIATEI
LRCEDVNVRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSIFRLKKTWLKVSKQTKT
VIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDYQPKAVLYLLDQSLVMDEEGLYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaattcgacttaatgatggtcatgtcacctacctgggtcttttggcaaag
aaagatggcacgaggcgaggctgtttaagcaaaaagagctcagacaacacaaaatggcac
accaagtggtttgccctgttgcaaaatatgcttttttattttgaaagcgagtccagctcg
cgaccttcgggattatacctgttggagggatgtgtgtgtgacagggcgccctcacccaaa
ccttcactatcagccaaggagtgcttagaaaaacagtattatttcactgtcagcttcaac
catgagaatcagaaggctgtggagcttcgtacagaagacgttaaggactgcgatgaatgg
gtggcagcaatatcacatgccagctacagaaacctggccaccgagcatgaaacgctcatg
cagaagtacctccatctactccaaatcgtggagaccgagaaaacagttgctaagcaactt
cgacaacagatagaagatggggagattgagattgaacgtctaaaatcagagattgcagga
atgctcaaagacaatgagaagattcagtcgaatcccaccactgcacctagtgatgatgat
tctgagatcaagaaaatcaagaaagtgcaaagcttcctgaggggctggatgtgtcggcgg
aagtggaagaccatcattcaggactacatccgttctccacacgcggagagcatgaggaag
aggaaccaggttgtctttagcatgctggaggccgaggccgagtacgtccaacagctccac
atccttgtcaacaacttcttgagaccgcttcgcatggctgccagttccaagaaaccaccc
ataacccatgatgatgtcagcagcattttcctaaacagtgaaaccataatgtttctgcat
cagatattctaccaagggttgaaagctcgaatagcaagctggccaacattagtcttggcg
gacctatttgacatcctgttgcccatgctcaacatctaccaggagtttgtgcgtaatcac
cagtacagtttgcagatcttggcccactgcaagcagaaccgagacttcgataagctgctt
aaacagtatgaagccaagcctgactgtgaagaacgcacgctagagacgttcctcacctac
ccaatgttccagattcctcgttacatactgaccctccacgagctgttagcgcatacgccg
catgagcatgtggagagaaacagcttggattacgccaagtcaaagctggaggagctttcc
agaatcatgcacgatgaggtgagcgagacggagaacattaggaagaacctcgctatcgag
cgtatgatcgtggagggctgtgagattctcttagacaccagccagacctttgtcagacaa
ggatctctgatacaagtgcccataagtgagaagggcaagatcacccgtggccgactgggc
tctctgtctctaaagaaggagggagagaggcagtgtttcctcttctccaaacatctgatc
atctgcactagaggctctggaggaaaactacacctcaccaagaacggagtgatgtcgctc
atcgactgtacactgatagaggaaccagagggcaccgatgaggagtccaagtcagacaag
agcggtcaggacatggagcacctggattttaagattgtggtggagcccaaagacagccag
tccttcaccatcatcctggtggcctcctcgcggcaagagaagtcagcctggaccagtgac
atcagccagtgcatagataatattcgttgtaatgggctgatgatgaacgcctttgaggag
aactctaaagtcactgtgccacagatgatcaagtctgatgccagtctgtactgtgatgat
gtggacatccgctttagtaagatgatgaactcgtgcaaagtgttgcagatccgctacgct
agtgtggaacgcctgctcgagaggttgaccgacctgcgcttcctctccatcgacttcctc
aacaccttcctgcactcctaccgcgtgttcaccagcgcagaagtagtcctcgacaaactc
atcaccatatacaagaggcccatcagcgccataccagcccgatccctggagctgtttttc
gcgagcagccagaacaacaagctcctctacggagagcctcctaagtcgccccgtgccagc
cgcaagttctcctccccacccccgctggccatcaccaagacctcgtcccccaaccggcgc
cgcaaactgtccctcaacatccccatcatcaccggtgggaaggctctggacctggcggcc
cttagctgttcccccaatggctatgcaagcatgtactcatccatgtcccctttcagcaag
accactctggacatcaacaagctctacgtgtccagccccgtctccagcaagatacccgac
gagagcgagggcaagacggacaagactgatgaggtttcaccgtgcaaacaggatggttca
gtgagggaggaaaacgacaacgacccgatccagagtgacgaggcagaggctgaagtatcg
cccaccaaatcacccaccactcccaaaaacgtcaaatgcaaaaactcctcagaattctct
ctgttctcgtacaataatggcatggtgatgtcgtcctgccgggagctggataacaaccgt
agcgccttgtctgccgcttctgccttcgccatcgccactgctggtgccaacgagggcacg
ccaaccaaggagaagtaccgtcgcatgtctctggcaagcacagggttccccacggatcag
aggaacggagataaggagtttgtgattcgtcgagcagcaactaacagagttctcaatgtt
ctcaggcactgggtgtccaaacactcgcaggactttgaatccaacactgagctgaaaatg
aaggtgattagtttcctggaggaggtgatgcatgatcctgaacttctgacccaggaaagg
aaagctgcagccaacatcataaggacattgacacaggaggatcctggtgacaatcagatc
tgtctggaggaggtgctgcagatggcggaaggaggaaagtcagagcctttcgagaatcat
tcagctctggagatcgcagaacagctcaccctgctggaccaccttgtttttaaagtcata
ccatatgaggagttttttggtcaaggatggatgaagaatgacaaaaatgagaaaacacct
tacatcatgaaaacgacaaaacacttcaatgatatcagtaacctgattgccacagagatc
ctgcgctgtgaggatgtgaatgtacgggtagcagtgatggagaagtgggtggcagtagct
gatatctgccgctgtctccataactacaatgctgtgctggaaatcacctcatccctcaat
cgcagctccatcttccgtctgaagaaaacttggctcaaagtttctaaacagaccaaaaca
gtcattgacaagctgcagaagttggtctcatctgaaggaaggttcaagaacctcagagag
gccttaaaaaattgtgaccctccctgtgtgccatatttgggaatgtacctcactgacttg
gcctttattgaggaagggacccccaactacacagaggacaacctggtcaatttttccaag
atgagaatgatctcccatatcatccgagaaatcaggcagtttcagcaaacggcatacaag
attgattaccagccaaaggcagtactgtatttactggaccagagcttggtaatggatgaa
gaaggcctgtatgaagcctctctcagaattgagcctaaagtgcccaactga
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