KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130088932
Entry
130088932         CDS       T09701                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130088932 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rkg03041]
    130088932 (cdc5l)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130088932 (cdc5l)
Spliceosome [BR:rkg03041]
 Complex B
  Other components
   Prp19 complex
    130088932 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    130088932 (cdc5l)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    130088932 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072
Other DBs
NCBI-GeneID: 130088932
NCBI-ProteinID: XP_056111918
LinkDB
Position
Unknown
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRENEDDVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMELYDPLEPDFK
RLRQQHLDKDLRSEKEDRDRKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPKTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGA
EGMTPQGGMTPKPSVGVTPGRTPLRDKLNINTEEGSVDYSDPSFAKHLQRESREQLKLGL
MSLPVPKNDFEIVLPENAEKELEEAEVDESFVEDAAEIELRKQAVRDAEREKELRQRHTA
VQRDLPRPSEVNETILRPHNVEPPLTDLQLAEELVKKEMITMIHYDCLHHPFSDIQARKG
KGVGSSSNNAEHISYLEKTPYNKISEEELKKAGELLGQEMEVVKHGMSHGDLSMEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESMEKKLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLLKQLSELWDQVEQANVELHTFQELKKQEDHAIPRRKEALREDVQRQQDR
EKELQQRFADLLLEKQTLSQKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggaggcgtgtggcgcaacactgaggatgagattctcaaa
gcagctgtaatgaaatatggcaaaaatcagtggtctcgaatcgcatccctgctgcaccgc
aaatcagccaaacagtgtaaagccagatggtatgagtggctggaccccagcattaagaaa
acagaatggtcacgtgaggaagaggagaaacttcttcatttggccaaactgatgcccact
cagtggagaacaatcgcccccatcattggacgaacggctgctcagtgtctggagcattat
gaatttctgctagataaagctgctcagagagagaatgaagatgatgtgggcgatgaccct
cgcaaactaaaaccaggagagatcgacccaaaccctgagaccaaaccagccagacctgac
cctgtggatatggatgaagatgagctggagatgctgtctgaagccagagctagattggcc
aacacacaaggcaagaaggcaaagcggaaggccagagagaaacagctggaggaagcgcgt
cgtctggcagcacttcagaagcgcagggaactgcgagcagcaggcatcgacatccagaag
aagcgcaagaagaagagaggtgtcgactataatgctgagatcccgtttgaaaagaaaccc
gctcagggtttctacgatacgtccatggagctgtatgatcctttggagcctgacttcaaa
cgactgcgccagcagcatctggataaagatctcaggagtgagaaggaggatcgcgaccga
aagaaggacagacagaagatcaagaagaagaaggagtccgatctgccttcagccatcctg
cagaccagtggagtgtcagagttcacaaagaagagaagcaaactggtgcttccggcacca
cagatctctgatgctgagctggaggaggtggtcaaactgggtcaggccagcgaaatcgcc
cgtcagactgcagaggagtctgggatcaccaactctgcctccagcgctctcctgtctgaa
tacaacgtgaccaataactccatggccctgcgcacacccaaaactccagcggcacaggac
aagatcctgcaggaagcccagaacttgatggcacttacgaacgtggacacccctcttaaa
ggagggctgaatacccccctccatgagagcgacttctctggtgtcactccacagagacag
gtggtccagacgcccaacaccgtgctgtctacacccttcagaacccccagccacggagcc
gagggcatgacccctcaaggtggaatgactcctaaaccctcggtgggtgtgaccccgggc
aggaccccgctgcgggacaaactcaacatcaacacagaggaggggagtgtggactacagt
gacccgtcatttgccaaacacttgcaaagggagtcccgcgagcagctcaagttgggcttg
atgtctctgccggtgcccaaaaatgattttgagattgttcttcctgaaaacgctgagaaa
gagctggaggaagctgaggtggacgagagttttgtggaggatgcggccgagatagaactg
cgtaaacaggccgtgagagatgctgagagggagaaggagctgcgtcagagacacacggca
gttcagagagatttaccaagaccttcagaggtgaatgagacgatactccggcctcataat
gtggagccgcctctgacggacctgcagctggcagaagaactcgtcaagaaggaaatgatc
accatgatccactacgactgtctgcatcaccccttcagtgacatccaggccaggaagggt
aaaggagtgggatccagctccaacaacgcagagcacatctcctacctggagaaaacaccc
tacaataagatctcagaggaagagctcaaaaaggcaggagagctgctgggtcaggagatg
gaggtggtgaaacatgggatgagtcatggagatctctctatggaggcttataatcaggtg
tgggaggagtgttacagtcaggtcctgtacctgcccggacagagccgctacacccgagcc
aatctggccagcaagaaggaccgaatcgagtctatggagaagaagctggagattaacaga
ggtcacatgaccacagaagccaagcgtgcggcgaagatggagaagaagatgaagattctt
ctgggcgggtatcagtctcgggccatgggactgctcaaacaactcagtgaactctgggat
caagtggaacaggcaaacgtggagctccacaccttccaggagctgaagaaacaggaagac
cacgccattccacgcaggaaggaggccctgagagaggatgttcagaggcaacaggacaga
gaaaaagagctgcagcagagattcgctgacctgctcctggagaaacagacgctctcgcag
aagttctga

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