Rhinichthys klamathensis goyatoka (western speckled dace): 130088965
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Entry
130088965 CDS
T09701
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130088965 (smc6)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
130088965 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
Trans_reg_C
AAA_15
Motif
Other DBs
NCBI-GeneID:
130088965
NCBI-ProteinID:
XP_056111974
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All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MQRNGFGHLSAMNKRKSCAHNVVKPSKTTRTDGKTHVQDEEEVDEEDGVQQDHSLSSSCA
GDIGVIESITLRNFMSHHSLGPFKFGPNVNFIVGNNGTGKSAILTALIVGLGGKATTTNR
GTSLKGFVKYGESSADIKVKLKNRGNDPYKGDIYGDSICIEHRISSDGCRTCKIKSKMGH
VISTKKEELTAILDHFGIQVDNPVSVLNQEMSKQFLHSKSEADKYKFFMKATLLEQMKRD
YIHIKQTKALTRDQVERQEECLKDLRQLFLQKKERYERLSSLDDMRQTLEELKKKMAWCL
VREKERQVEQLEEQIEKEESDCKNEEKLQLCQNKVSTAEKRLQDIQLKLCTLREEQEQLA
EESHKMKEEIKVKTKAQKNQEVVYFRAENKLKQLEKEQCLLQERIHKISHGSGRRSHETE
HAQHLKKISAFKTQLEKLETESSALNQEIKDKQQALFKGREEYDKLSMEEKNIQVSLEFK
LKRKKQLMASRSNRLKRFGDHMPELLELIDKAFAQGRFVKKPVGPIGACISLKDPSLAVA
VESCLLGFIKTFCCDNYRDEKVLQGLMSSYFPNGSRPQIIVCPFTDRVYNVQGRGVHHPE
FPSVLDCLNAENPVIINCLIDMRGIECILVIKDHARARKVMQGSTPPRNCREAFTAGGDH
VYYNRSYTPNNEVLVKYLGGDPEAEIRLVESELENNQAQLLRFQLHLSSVKEDIQFMEEK
LRSVIRACKKNQQCINEVKASITELENIEEAQAEDISSLEEDAQENEQKIESERKNVKEA
RDELKNHEKGLMNINQKYKDVKNKMEQLSDETEQLKEEQVKAETVCSKLDQTMKVLEKKL
EDHQANIQAMRDEVSIREEETLDCEAKAKEICPVRQQVDQSARSIDVEITRLRQKITTQE
SSHGDKEQVIREYAEAHSNYKSKSSQLRDLRKFIDRLDNIMIDRQDRYKSLRRSLSVRCK
LYFNNFMMQLHCCGSMIFDHITETLSISVKPPGQERNNVSDMRSLSGGERSFSTVCFILA
LWEITESPFRCLDEFDVYMDMHNRSISMNMLVALSERQHLRQFIFITPQSTSHLPKSANI
TIHQLQDPEKVAEEE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaatggctttgggcatctttctgccatgaataagaggaaatcttgtgctcac
aatgttgtaaaaccctctaagactactaggacagatggtaaaacacatgtacaggatgag
gaggaggttgatgaggaagatggagtccagcaagatcactcactctcttcttcgtgtgcc
ggagacatcggcgtgatagaaagtatcactttaaggaactttatgagccaccattcgctt
ggacctttcaaatttggaccaaatgtcaacttcattgttgggaacaatggaactgggaaa
agtgccattctgacagcacttatagtgggtcttggtggaaaagcaactacaaccaataga
ggaacatctttgaagggctttgttaaatatggagagagttctgcagacattaaagtgaaa
ttaaaaaacagaggaaatgacccttataaaggtgacatttatggagacagcatctgcatt
gagcatcggatctcaagtgatggttgcaggacttgtaaaatcaagagtaaaatggggcat
gtcatttccacaaagaaggaggagttaactgctatactggatcattttggcatccaggtt
gacaatcctgtgtcagtccttaatcaagaaatgagtaaacagttcctgcattcaaaaagc
gaagcggacaagtacaagtttttcatgaaagcaactcttctggagcaaatgaaaagagac
tacattcacatcaagcagactaaagccttgacacgtgaccaggtggaaagacaagaggaa
tgtctcaaagatctcaggcagttgttcttgcaaaagaaagaaagatatgaacgcttgtcg
tcgctcgacgatatgagacagactctagaggagctgaaaaagaagatggcgtggtgtttg
gtgagggagaaggagagacaagttgaacagctggaggaacaaattgaaaaagaagagtct
gattgtaaaaatgaagaaaagctgcagctctgtcagaacaaagtttccactgctgagaag
agattacaggacatccagttgaagctttgcacgcttcgagaagagcaggaacaattggca
gaggagagccataaaatgaaggaggaaattaaagtcaaaacaaaagcacagaaaaatcag
gaggtggtttacttccgcgctgagaataaattgaaacaattagaaaaggagcaatgcctt
cttcaggagagaattcacaaaataagtcatggcagtggcagaagaagtcatgagactgag
cacgcacagcatctaaaaaaaatatctgccttcaaaacacaactggaaaagcttgagaca
gagtccagcgctctgaatcaagagattaaggacaaacaacaagctctgtttaaaggaaga
gaggaatatgataaactgagcatggaggaaaaaaacatccaggtctctctggagttcaaa
ctgaagagaaaaaagcagctaatggccagcagatccaacagactgaaacggtttggtgat
cacatgccagaattgttggagttaatcgacaaagccttcgctcaggggcgattcgtcaag
aaacctgtgggaccaataggtgcgtgcatcagcctaaaggatcccagtttagccgtggct
gtggagagttgcttactaggtttcatcaaaaccttttgctgtgacaattacagggacgaa
aaagtcctgcaaggactgatgtcatcatatttcccaaatggcagtaggcctcagataatc
gtgtgcccattcacagaccgtgtttataacgttcaaggccgtggagtccatcatcctgag
tttccatcagtgctggactgcctcaatgccgagaacccagtgataataaactgcctcatt
gatatgaggggcattgagtgcattctggttatcaaagaccatgctcgtgcaaggaaagta
atgcagggttcgacgccgccgaggaattgccgtgaagccttcactgcaggtggtgatcat
gtgtactacaatcggtcttacacccctaacaacgaagtactggtcaaatatcttggtggt
gacccagaagcagaaatacgtctagtggagtcagagctggagaacaatcaggctcagctt
ttacggttccagcttcacttgagctctgtgaaggaggacattcagttcatggaggagaag
ctgcgtagtgtcatcagggcctgcaaaaaaaatcagcaatgcataaatgaggttaaagct
tctataacagaacttgagaacattgaagaggcacaggctgaggacatcagctccctggaa
gaagatgcacaagagaatgagcagaagatcgaatcagagaggaaaaatgtgaaagaggct
cgagacgaattaaagaatcatgagaaagggctcatgaatattaatcagaaatataaagat
gtgaaaaataaaatggagcaactgtcagatgagacagaacaactgaaggaggagcaagtg
aaggcagagactgtgtgcagtaaactcgatcaaaccatgaaggtcttggagaagaaactc
gaggatcatcaggccaatattcaggccatgagagatgaggtgtcaatcagagaggaagaa
acactggactgtgaagccaaagccaaagagatctgtcctgtgcgacagcaggtagatcag
agtgccagaagtattgatgttgagatcacacgcctgcgacaaaaaatcactacgcaagag
agcagccacggtgacaaggaacaagtgatccgagagtacgcagaagctcacagtaattac
aaaagcaaatccagccagctgagggatctcaggaagtttattgatcgtctcgacaacatc
atgattgaccgtcaggaccgatacaaatcactgcgacggtcactctctgtgaggtgcaag
ctgtacttcaacaacttcatgatgcagctgcactgctgtggctcgatgatatttgaccac
atcactgaaaccctgtccatttcagtgaaacccccaggtcaggaaagaaacaacgtcagt
gacatgcgttccctctcgggaggagagcgctctttctccactgtctgtttcattctggca
ctctgggaaatcactgagtcacccttccggtgtcttgacgagtttgatgtgtacatggac
atgcacaatcgcagcatttcaatgaacatgcttgtggcgctttcagaacgtcaacatctg
cggcagttcatcttcatcacccctcagtccaccagccatctgcctaaaagtgccaatatt
acaatccaccagcttcaggatccagagaaagtagcagaggaggagtga
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