Rhinichthys klamathensis goyatoka (western speckled dace): 130088975
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Entry
130088975 CDS
T09701
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130088975 (stxbp5b)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130088975 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130088975 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
WD40_like
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
130088975
NCBI-ProteinID:
XP_056111990
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSSSSAAASPPSGSRENDMIQETLQSEHFQLCKTLRHGFPYQPS
SMAFDPVQKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLEFLVNEGALVSALADDS
IHLWNLRQKLPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVI
MWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYNYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNVRIPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYK
TTRAGEPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDFQE
PYAVVVLLEKDLVVIDLAQIGYPIFENPYPLSIHESPVTCCEYYADCPAEIIPALYSVGS
KQKRQGFSKKEWPVSGGNWGQGTLSFSEIIITGHADGSIKFWDASALMLQVLYKLKTAKV
FEKPRSKEEKSSTDIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVVQ
LLEVRMQCELNEVESPEGGGEQASAVSTPGTSSSPQTSLPQSHPSTSSNNSSDGLRDNVP
CLKVRSSPLKQSPGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGNGNGLAVVDYL
QKTLLLNMSTAELYGSTDPHHRQPRSPRKARQPSAGFCDGNDASATPEERCKSPTSGSGS
PCNSDEDSKHKFIDKVMFKSKRISKTVANDFAKISRKINMIADQKDERRVRRHCSLPVKK
QQSCVKEMKRRHAASFRETSLCDLNARDNSFSRSRSSSVTSIDRESREVVSSLYFCDSLS
KRSETLAVPSLWVGTSLGGMMAITLSVPSTPEQRMQQPVGVSFCGSVVRLKGGILRMAQL
DASGTFLPHVYEPWYEPNAPEEEREPPRRRRPTSLPSSQENQDCQYIVVCSEKQAKVVAL
PSQNCIYEHNITEASFVLRADVVTMTCGVGLACFCANGHIMTLSLPSLRPLLDVNYLPLT
DMRIARTFCFSNQGQALYLTSPTEIQRITYSQETCDNLQEMLGELFTPVETPEAPNRGFF
KGLFGGGAQSLDREDLFGEVTAGKASRSLAQHIPGPGGMEGMKGAASGVVGELARARIAL
DERGQKLGELEERTAAMMSSADSFSKHAHDIMLKYKDKKWYQL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgttggacggcttgactgcgtcctcctcttcctcc
tccgctgccgcgtcccctccatcgggaagcagagagaatgacatgattcaggagaccctg
cagtcagagcatttccagctctgcaagacactgcgacatggctttccctatcaaccctct
tccatggcttttgaccctgtacagaaaattctggctattggcacacagagtggagcccta
agactattcggccgagctggagtggagtgttactgccagcatgagagcggatcggctgtc
atccagctggagtttcttgtcaatgaaggggcactggttagtgctttggcagatgacagt
attcatttgtggaatctgaggcaaaaacttcctgccattctccattctcttaaatttaat
cgggagaggatcacgttttgccatttgccgtttcagagtaaatggctctacgtgggcacg
gagagagggaacattcacatcgtcaatgtggagtccttcaccctctcaggctatgtcatc
atgtggaacaaagccattgaactttcctcaaagtctcaccctggacctgtagttcatatc
agcgataaccccatggacgaagggaaacttttaattggttttgagtgcggtatagttgtg
ctgtgggacttgaaatcgaagaaggctgactatcggtacaactatgacgaggcgatccac
tcggtggcttggcatcatgaggggaaacagtttgtgtgcagtcactcagatggcacactt
accacatggaatgtacgcattcccgccaagcctgcccagatcattacaccgcatggtaaa
cagcccaaggatggaaagaagccggagccttgcaaacccatcttgaaagtggagtacaaa
actaccagggcaggggaaccattcatgatactgtgtggaggtttgtcatatgatacagtg
ggtaggcgagcctgtctgactgtgatgcatgggaaaagcactgcagtgctggagatggac
tactccatagtggatttccttacgctgtgtgaaaccccatatccaaacgatttccaggag
ccttatgctgttgtcgtcctgctggagaaggatttggttgttattgaccttgcacagatt
gggtatccgatctttgagaatccgtatcctctgtccatccacgagtctccggtgacctgc
tgcgaatattatgcggactgtcctgctgaaatcattcctgcactttactcagtgggctcc
aaacaaaaaagacagggcttcagtaagaaggagtggccagtaagtggaggtaactggggc
cagggaacactaagtttctcagagatcatcatcactgggcatgctgatggatctatcaag
ttttgggatgcctcagcattaatgctgcaggttttgtataagctaaaaacagcaaaggtg
tttgagaagccccgtagcaaagaggagaaatccagcactgacattgtggatgaagatccg
ttcgccatccagatcctgtcttggtgtccagagagtcgtgtgctctgtgtggctggagta
tcggctcatgtcatcgtctacaggttcagcaaacaggaagtcaccactgaagtggtccag
ctgctggaggtgcgtatgcagtgtgaactgaatgaagtggagtctcctgagggcggagga
gagcaggcgtctgccgtttccaccccaggaacatcatccagccctcagaccagcctgcct
cagtcccacccctccaccagcagcaacaactcctccgacggcctgcgagataacgtgccc
tgtctcaaagtcaggagttctcctctcaaacagtctccgggttaccaggtggagctgctc
attcagctggtgtgggtcagcggggagccgccacaacagatcaccagcctggccgtcaac
tctgcgtatggcctagttgcatttggcaatggtaacggacttgcagtggttgattacctt
cagaaaacacttcttctgaacatgagcacagccgagttgtacggctcaacagatcctcac
cacagacagccacgctcaccccgcaaagccagacagccttcggcaggtttttgtgatggt
aatgatgcatcagccaccccagaggagagatgtaaatcaccaacttcaggctccggttca
ccatgcaattctgatgaagacagcaaacacaagttcattgacaaggtgatgttcaaaagc
aagcggatatccaagactgttgccaatgactttgctaagatatcccggaaaattaacatg
attgctgatcagaaagatgaaaggagggtacgccgtcactgctctctccctgttaagaaa
caacagagttgtgtgaaggaaatgaagaggagacacgcagcgtctttccgtgagacctca
ctatgtgacctcaatgccagggacaactcgttcagccggtcgcgcagctccagtgtgacc
agcattgacagagagtcacgtgaggttgtttcctccttatacttttgtgactccctttcc
aagaggagtgagacgttggcagtgcccagcctgtgggtgggcacctcattgggcggcatg
atggccatcaccctcagtgtgccctctacgccagagcagaggatgcaacagcctgtgggc
gtctctttctgtggttcagtagtgcgcttgaaaggaggcattctgcgcatggcccagctg
gatgccagcgggacctttctgccccacgtttatgagccctggtatgagcccaacgcccct
gaggaagagcgagaaccgccacggagacgccggcccacctctcttccttcatctcaggag
aaccaggactgtcagtacattgtggtttgctcagagaaacaggctaaggtggtggcgctg
ccctcccaaaactgcatctacgagcacaacatcactgaggcctccttcgtgcttcgagct
gatgtggtgacgatgacctgcggggtcggcttggcctgtttctgtgccaatggccacatc
atgaccctcagtttgcccagcctgcggccactgctggatgtgaactaccttcctctgacg
gacatgaggatagccagaaccttctgtttctcaaaccaaggccaggccctgtacctcaca
tcgcccactgagatccaaagaatcacctatagccaggaaacctgtgataacctgcaggag
atgcttggagagctgtttaccccagtggagacaccagaggccccgaacagagggttcttc
aagggcttatttggaggcggcgctcagtccttggacagagaggacctgtttggagaggtg
actgctgggaaggcttcacgcagcctggcgcagcacatcccaggtccaggtggcatggag
ggcatgaagggggccgcgtctggtgtggtgggagagttggcacgggcaaggatagctctg
gatgagagagggcagaaactaggcgagctggaggagaggacagcagccatgatgtccagc
gcagactccttctccaaacacgcacatgatataatgctgaaatacaaggataagaaatgg
taccagctctga
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integrated database retrieval system
