Rhinichthys klamathensis goyatoka (western speckled dace): 130089000
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Entry
130089000 CDS
T09701
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130089000 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rkg03051
]
130089000 (psmc1a)
Proteasome [BR:
rkg03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130089000 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_28
AAA_3
AAA_25
ATPase
AAA_14
RNA_helicase
TIP49
NPHP3_N
AAA_33
NB-ARC
IstB_IS21
Prot_ATP_ID_OB_N
NACHT
Mg_chelatase
ABC_tran
AAA_7
Parvo_NS1
SLFN-g3_helicase
Zeta_toxin
Viral_helicase1
TsaE
AAA_24
Motif
Other DBs
NCBI-GeneID:
130089000
NCBI-ProteinID:
XP_056112052
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MGQSQSGGQGPGGGKKDDKDKKKKYEPPIPTRVGKRKKRVKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDELILAKEDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacaaggacctggtggagggaagaaagatgacaaggat
aagaaaaagaaatacgagcctcccattcctacaagagttgggaaaaggaagaagagagtg
aagggaccagatgctgctagcaaactgcctttggtcactccacacacacagtgcagactg
aaactcctcaaacaagagagaattaaagactatctgctgatggaggaggagttcatcaga
aaccaggagcagatgaaacctctggaggagaagcaggaggaggagagatctaaagtggat
gatctccgagggacgcccatgtcagtgggaactctggaggagatcattgatgataatcat
gccattgtttcgacttcagtgggctctgaacattatgtcagtattctgtcatttgtagat
aaagacctccttgagcccggctgctctgtgttactgaaccacaaggttcatgcagtaatc
ggggtgctgatggatgacacggaccctctggtgactgtaatgaaagtagaaaaggcccca
caggagacgtacgcagacattggaggtctggacaaccagattcaagagatcaaggagtct
gtggagcttcccctcacacatccagagtattatgaagagatgggaataaagccacccaaa
ggagttattctgtacggtgcaccgggaacaggcaagactcttctggcaaaagcagtggcg
aaccagacgtctgccaccttcctgagggtggtgggctcagagcttattcagaaatacctg
ggagatggtccaaaacttgtgcgagagctcttcagagtggctgaggaacacgctccatca
atcgttttcatagacgagatcgacgctataggcacaaagaggtatgactcaaattccgga
ggagagcgggagatccagagaacaatgttggagctgctaaaccaactggacggatttgac
tcccgtggggacgtcaaagtcatcatggctactaataggatagagacacttgacccagct
ctcattagaccaggtagaattgatcgtaaaattgagttcccactgccggatgagaagacc
aagcgcagaatctttcagatccacaccagcaggatgaccgtagcagatgacgtgactttg
gatgaactcatcctggctaaagaagacctctcgggtgctgacatcaaggccatttgcaca
gaggcagggctaatggctctgagggaacggagaatgaaagttactaatgaagacttcaag
aagtctaaagagaacgtcctgtacaagaagcaggagggaacaccggagggcctctacctt
taa
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