Rhinichthys klamathensis goyatoka (western speckled dace): 130089011
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Entry
130089011 CDS
T09701
Symbol
srp54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03060
Protein export
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
130089011 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rkg02044
]
130089011 (srp54)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
130089011 (srp54)
Secretion system [BR:
rkg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
130089011 (srp54)
Eukaryotic Sec-SRP protein
130089011 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
NPHP3_N
AAA_33
DUF2209
MeaB
AAA_17
ResIII
SRPRB
AAA
MobB
AAA_22
APS_kinase
AAA_19
Zeta_toxin
AAA_30
PduV-EutP
AAA_31
nSTAND_NTPase7
6PF2K
MMR_HSR1
AAA_16
ATP_bind_1
AAA_18
Thymidylate_kin
Torsin
KTI12
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
130089011
NCBI-ProteinID:
XP_056112078
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
TENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttttagctgatcttgggaggaaaataacctcagctttgaggtctctgagcaatgcc
accattatcaacgaggaggtattaaatgctatgctcaaggaagtctgcgctgccctgctg
gaggctgatgtgaatatcaagttggtaaagcagcttagagaaaatgtcaaggcagccatt
gatctggaggagatggcctctgggctgaacaagagaagaatgatccagcatgctgttttc
aaggaacttgtcaagctggtggatcctggagtcaaagcctggactcccacaaagggaaag
aacaacgttatcatgtttgtgggtctgcagggcagtgggaaaaccacaacatgttcaaag
ttggcatactacttccaaagaaaaggatggaaaacatgtttgatttgcgccgacacattc
agagcaggtgccttcgaccaactcaagcaaaatgcaacaaaagccagaatacccttttat
gggagttacacagaaatggatccagtggtcatagctgcagagggtgtggaaaaattcaag
acagaaaactttgaaataatcattgtggacactagtggtagacataaacaggaagactca
ctttttgaggaaatgcttcaggtgtcaaatgctgtgcaacctgacaacatagtgtatgtg
atggatgcctccattggtcaggcttgtgaggctcaggctaaggccttcaaagacaaggta
gatgtggcttctgttattgtcaccaaactggacggccatgccaagggtggtggtgcactc
agtgctgtggcggccacaaagagtccaatcatttttatcggcacaggcgagcacattgac
gacttcgagcctttcaagactcagcccttcataagcaaactgctcggtatgggagatatt
gagggactgattgacaaagtgaacgaactaaagcttgatgacaacgaggagctaattgac
aagctgaaacatggtcagtttacactcagggacatgtatgaacagtttcagaacatcatg
aaaatgggaccttttggtcagatcatgggcatgatcccaggctttggaacagatttcatg
agcaaaggaaatgagcaggagtcaatggccagactaaagaaactcatgacaataatggat
agcatgaatgaccaggaactcgacaacaaggatggtgccaagctattcagtaaacagcct
aaccgcatccagcgagtggcccggggatctggagtggctaccagggatgtacaagagttg
ctcacccagtacacaaagtttgcgcagatggtcaagaagatgggaggcatcaaaggcttg
tttaaaggaggggacatgagcaagaacgtcaacccttcacagatggcgaaactgaaccag
cagatggctaaaatgatggatcccagagtgcttcatcacatgggtggcatggctggactg
cagtccatgatgaggcagtttcagcagggagctgctggcaacatgaaaggcatgatggga
tttaacaacatgtga
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