Rhinichthys klamathensis goyatoka (western speckled dace): 130089087
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Entry
130089087 CDS
T09701
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130089087 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130089087 (stau1)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130089087 (stau1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130089087 (stau1)
mRNA cycle factors
Stress granule specific factors
130089087 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
130089087
NCBI-ProteinID:
XP_056112147
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSQLQFQTPVNTAPSAAPLQLAPPQPGFSIPCSTAPLPSESASHPLRNSALPSASATPFC
NPTVSNMANPKEKTPMCLINELARYNKIQPEYKLLSEQGPAHSKIFSVRLSLGDQHWDAE
GTSIKKAQHSAASCALAETTLPKPSHRSPRHPGKNPDGIYKGSDYNITHTVELNALCMKL
GKKPIYKPIDAYHGMRPAFNYNIRAPGPYARSMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPIMQQLSEMKEEPIQENLNKSEISQVFEIALKRNLP
VNFEVLKEAGPPHMKSFMVRVTVGEYSGEGDGKSKKIAKKLAAMAVLEELRGLPQLPVTD
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYALVTERGLPRRREF
VMQVSIAGQNAEGMGPSKKVAKRNAAEKMLELLGFKVPQPQPHKPALKTDEKAPAKKPGD
GRKVTFFEPGSVDKAGLAVNKEEDFRFPYLSHQQLPAGILPMVPEVAQAVGANQGPHAKD
YGRTAAPNPAMATVTAMIANELLYAGTSPTAEGILKTKNSLTHRPHGPLTRPSEQLSYLA
TVQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELD
QQSNERTANGPMSGCNKQDLEGSALLKPANSSTIGKTLDGTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccagacgcccgtcaacactgcacctagtgccgcccctttacag
ctggccccgccccaacctgggttcagcattccctgttccactgctcccttaccctcagag
agtgccagtcacccgttgcgaaactccgccctgccttctgcatccgccacgcccttctgc
aaccccacagtatctaacatggcaaaccctaaagagaagaccccaatgtgcttgataaac
gagttagcccgttacaataagatccaacctgaatacaagctactcagtgaacaaggacca
gcccactccaagattttctcagtgcggttatctctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcatcatgtgcccttgccgaaactact
ctccccaaacccagtcacagaagcccccgccaccctggcaagaacccagatgggatctac
aagggctcagattataacataacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctataagcctatagatgcctaccatgggatgagaccagcattcaac
tacaacatcagagcacctggcccttatgcacgctccatgcagcattattactacccattt
cctcctgtgggaccagtactgtatcatatggagctgtctatcggtggacaacagttccat
ggcaagggccgcacgcgtcaagcagccaaacatgatgctgcggccaaagctatcaaatac
ctgcagaaagagccaataatgcagcaactgtctgagatgaaagaagagccaatacaagaa
aaccttaacaaatctgagatcagccaagtgtttgagattgcactgaagcgcaacttgcct
gtgaatttcgaggtgctaaaagaggctggtcctcctcacatgaagagcttcatggtgagg
gttactgtgggcgagtattcaggggagggggatggcaaaagcaagaagatcgccaagaag
ctagctgccatggctgtgctggaggagcttcgtggactgcctcaactgcctgtcacagac
aaaataccactacgcattaaaaagaaaagcaagtccattattaagctgcagaccagtcca
gagtatggtcagggcatgaaccccatcagcagactggctcaaatccagcaggctaagaaa
gaaaaagagccagagtacgcgttggtgacggagagaggtctgcctcgacgccgggagttt
gtcatgcaggtgtcaattgcaggtcagaatgcagagggaatgggtcctagtaaaaaagtg
gccaaacgaaatgcagccgagaagatgctggagcttctgggcttcaaagtgcctcagcca
caaccacacaaaccggcattgaaaacagatgagaaagcacctgctaagaaacctggagat
ggacgaaaagtgaccttctttgaaccgggatctgtggacaaggctggtcttgcagtcaac
aaagaggaagatttccgatttccttatctcagccatcagcagcttcctgctggcatttta
cccatggtgcctgaggtggcacaggcggtgggtgccaaccagggaccccatgcaaaagac
tacggtcgtacagctgcccccaacccagccatggccacagtaacggccatgattgccaat
gagctgctgtacgctggcacgtccccgaccgcggaaggtatactaaagaccaaaaacagt
ttgacacacagaccccatggaccccttaccagaccatccgaacagctcagctacctggcc
actgtacagggattacaggttgaatataaagactttcccaaaaataacaagaatgagttt
gtgtctctgatcaactgctcctctcagcctcctctcatcagccacggcattggcaaggat
gtggagtcctgccatgacatggctgctttgaacatcctgaagctcctgtcagaactcgac
cagcagtccaatgagcgcacagctaatggaccaatgtcagggtgcaacaaacaggaccta
gagggcagtgcattattaaaaccggctaactcaagcaccatcggaaagactctggatggc
acagtgtag
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