Rhinichthys klamathensis goyatoka (western speckled dace): 130089102
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Entry
130089102 CDS
T09701
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130089102
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
130089102
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Contactins
130089102
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
Others
130089102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Tissue_fac
C2-set_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
130089102
NCBI-ProteinID:
XP_056112175
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MLLPWELLILLSLKSCLAERIIRHGPVFTQEPSDSVFPLSAEDNKIFINCKAKGSPEPHY
KWKFNGKDLDIDMDFNYSLVEGNLLISKPQATKHPGVYQCIATNAFGTILSREAKVEFAY
LQNFSSKARSPVLVREGQAVVLLCGPPPHFGDIRYSWIFNGRPSVTVGDNRRFVSQRTGN
LYIAKVETSDVGNYTCVVRNVMTNTTVHSSPTPVVLRRDAVMGEYEPKIEVQFEKMLHVA
KGSSVRLECFALGNPVPSISWKRADGSPFPGKMKINHSNGVLEIPYFRPEDSGLYECVAE
NSKGRSIAKGRLVFQNVEHLQWSQTLYDANMAIESDLHWECKANGKPQPVYRWLTNGQPL
VSQDRIRVDGGRLTISNINLMDSGMYQCLAENDNGVIYASAELKVVASPPDFSKNALKKS
TLIQRGGEAVIECRPHASPKASYSWRRGNEFLKDSKRRTILEDGTLRIANVTKSDAGRYT
CVARNPFGTSSSSGTLVVKEPTKITVPPLSMDGTVGESIVLPCEVSKDSTLHPVFKWFFN
GKLIDFSRHDHFWMIGGGSSGDLMIRNVQLKHSGKYVCMVHTAVDSVSAAADLIVRGPPG
APVGVLVGDVTDSTAQLSWGPGPDNHSPVTLYIVQARTPFSIGWQAVKTVPDSVPGQMIH
ATAVNLNPWVDYEFRVVAINGVGVGEPSVPSKPVRTKAADPEVAPANVSGGGGNRGELVI
VWESLPEELQNGEKFGYVVAFRPLGTTTWKQSVLASADASRYVYKNDTFPPLTRFEVKVG
VFNDIGEGPFSPVVVVYSADEEPSVAPPRVWARTLSASEIEVFWEPVHQSGGKGRITGYE
VQWLEDGSPESDAERVRVTESSVNITGLKGSTIYLMSVRAHNSAGTGPSSTPISITTKKP
PPSQAPGNIEWNLTNSKVFLNWEHVKAMDNESEVTGYKVVYRQNWHRGSSVVETNRTSVE
LQVPSEEDLLVQIKALSDGGDGSSSSPIRIPKMSSKASCLNSRGYFSSDASKMAHVHGVV
FLMLSLVFS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgccatgggaactcttaatcctgctgtcactcaagagctgcctagcagagaga
attattcgacatggcccggtgttcacgcaagagcccagtgacagtgttttccctttaagt
gcagaggacaacaagatatttattaactgcaaagccaagggaagtccagagccacattac
aagtggaaattcaatgggaaagatcttgacattgacatggacttcaactacagtcttgtt
gagggaaaccttttgatcagtaaacctcaagcaactaaacaccccggtgtttaccagtgt
atcgccactaatgcatttggaaccattctgagccgagaggctaaagttgagtttgcatac
ctgcagaatttcagcagcaaggccagaagtccagtattagtgagggaaggacaggctgtt
gtgctcctgtgcggtccgccaccccactttggagatatcagatattcctggatatttaat
ggccgccccagcgttactgttggggacaaccgacgctttgtgtcccagaggactggaaac
ttatatatcgctaaggtagagacgtcagacgtgggcaactacacatgtgtggtgaggaat
gtgatgaccaacacgacagtccacagttccccaactccagtggtgctacgtcgggatgct
gtgatgggggaatatgagccaaagattgaggtccagtttgaaaaaatgctccacgttgcc
aaaggatcatcggttcgactggagtgtttcgctttaggaaatccagtgccttctatttcc
tggaagagagcagacggaagccctttccctggaaaaatgaagataaatcactcaaatggt
gtcctagagatcccatatttccgtccagaggattctggactttatgaatgtgtggccgaa
aactccaaaggacgcagtattgcaaaagggcgtcttgtttttcaaaatgtggaacacctg
cagtggtcgcagactctatatgacgcaaacatggctattgagtctgatcttcactgggag
tgcaaggctaatggaaaacctcaacctgtttacagatggctcacgaatggacagcctttg
gtctctcaggacagaattcgtgttgatggtggcaggttaaccatctccaacataaacctg
atggattctgggatgtatcagtgtttggcagagaatgataacggagtcatatatgctagc
gctgaactcaaagttgtggcctcacctccagacttctcaaaaaacgcactgaagaagagc
acactgatccagagaggtggagaagctgtcatcgaatgccgaccgcacgcgtcccccaaa
gcttcgtactcttggaggagaggcaacgagttcctgaaagacagcaagaggcggaccatt
ttagaggacggcaccctcaggatcgccaacgttaccaagtctgacgcagggaggtacact
tgcgttgccagaaaccccttcggtacatccagcagttctgggactttagtggtcaaagaa
ccgaccaagattactgtcccccctttgagtatggatggcacggtgggggagagcattgtc
ttgccttgtgaagtatctaaagactccactctacaccccgtcttcaagtggttcttcaac
gggaaactcatcgatttcagtagacatgatcacttctggatgattggagggggatcttct
ggggatctcatgatcagaaacgtgcagctgaagcactctgggaagtacgtctgcatggtg
catacagcagtggacagtgtgtctgcagcggcagacttaattgtcagagggccccctggt
gctccagtgggtgtgttggtgggggacgttacagacagtactgctcagctctcgtggggc
cccggacctgacaaccacagtcccgttaccctctacattgtgcaagccaggacccctttc
tctatcggttggcaggcagtcaaaaccgttcctgattctgtgcctggacagatgattcat
gcgacggcagtgaatctaaatccgtgggtagattatgaatttagagttgtggctatcaac
ggcgtgggggttggggaacccagtgtgccatccaaacccgttcgcaccaaagctgcagat
cctgaagtcgccccagctaacgtgagtggaggtggaggcaaccgaggcgaactcgtgatt
gtttgggagtctttgccggaggagctacaaaatggagaaaagtttggttatgtggtggca
tttcgtccgcttggcactaccacatggaaacagagcgtgctggcctcggctgatgcatca
cgatatgtttataaaaatgatacgtttccaccactcacacggtttgaagtaaaagtcggc
gtcttcaacgacatcggagagggaccgtttagcccggtggtcgttgtatattcagcagat
gaagaaccctcggtagctcctccaagagtctgggcccgcactctgtctgcgtctgagatc
gaggtattctgggaacctgtccaccaaagcggcggcaaaggacggataacaggctatgag
gtgcagtggttggaggatgggtcaccagaaagcgatgcagagagggtaagggtcacggaa
agctcagtcaatatcacaggcctgaagggaagcacaatctatctgatgtcagtcagagca
cacaacagcgctggcaccgggccctccagcacccccatcagcatcaccaccaagaagcca
cctccaagtcaagctccagggaacattgagtggaacctgaccaactcaaaggtctttctg
aactgggaacatgtgaaggcgatggacaatgaatcagaagtaacaggctacaaggttgta
tatcgtcaaaactggcacagaggaagcagcgtagtggagaccaacaggacgtccgtggag
cttcaggtgccgtcagaagaagacctgctcgttcagatcaaagccctgagtgacggagga
gacggcagcagcagcagccctatacggataccaaagatgtcaagtaaggcttcatgcctg
aactcaaggggatacttcagttcagacgcaagcaagatggcccatgttcacggagtagtg
tttctgatgttgtcattggtgttttcatag
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integrated database retrieval system
