Rhinichthys klamathensis goyatoka (western speckled dace): 130089190
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Entry
130089190 CDS
T09701
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130089190 (lingo3a)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130089190 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_14
LRRNT
V-set
Cupin_1
Ig_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
130089190
NCBI-ProteinID:
XP_056112354
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAGCPCLSLPGLLVLLTAASITHGQSCPQRCDCISHQRAVMCQNKRLGSIPGGIPADTQL
LDLSCNSLRWVEYNELATLSRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLTNLTTLDLSGNKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSITGQSLSYLRGLVTLRLRYLSISSLEEQNFRKLGGLRALEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLISVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFNGKSPVCATPLEVRGKALSIFSDSALFDHFTCQRPKIRNRKLQQMT
AREGQVVSFVCRADGDPTPVIFWISPQRRRITTKSTGRIIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDGSLAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccatgcctgagcttaccggggctgcttgtgctcctgaccgctgcatcc
ataacacatggtcagagctgcccacagcgctgtgactgcatctctcatcagagagctgtg
atgtgccagaacaagcgcctgggatctattcctgggggcatcccggctgacacacagctc
ctggatctgagctgcaacagtttacgctgggtggaatacaatgaattggcgactctctcg
agacttgaggagctagacttgagtgagaatctcatcagcgtattggagcctaatgccttc
tccagcttgcttaatcttagagtgttgcgtctgcgagccaaccagcttaaactcgtgccc
atgggtgccttttcacgtctcaccaacctcaccactctggacctaagtgggaataaactg
gtcattctgttagacttcaccttccaggatttgaggaacctccgcaatttagaagttggt
gataatgacctggtgtacatttcaaacaaggctttcctgggattggtgggactccgggag
ctaaccatcgagaggtgcaatctgacttctataactggacaatctctttcctaccttcga
ggcttggtgactcttcgattacgctacctcagtatctcttccctggaagagcagaacttt
cgcaaactgggtggactgcgggctcttgagattgaccattggcccttccttgagtacatc
tctccgcacagcttccaaggtctcaacctgtcttggctctcgattaccaataccaacatt
tccaccgtgcctacgggtgctcttcgcaacctaattcacttggctagcctcaatctgtct
tacaaccccatctcggttctcgagtcctgggccttgagggaccttgtccgcttgaaagaa
ctgcacctagttggtaccaacttgatatcagtgcagccctatggtcttggaggcctgcaa
cagatacggttgctcaacttgtcgaacaatgggttggtgaccttggaggagggatccttc
cactcagtcaatacactggagacgttacgtgtagatgggaaccctttgtcctgtgactgc
cgcctactgtggatcctgcagcgccgtaagaccctcaacttcaatggaaagtcgcccgtt
tgcgctacacccttggaagtgcgaggaaaagcacttagtatcttttcggactctgcactc
tttgaccatttcacttgtcagcggcccaaaattcgtaaccgcaagctgcaacagatgacg
gcacgtgaaggccaggtagtatcgtttgtatgtagagcagatggagacccaactccagtc
atcttttggatttcacctcagcgccgacgtatcaccaccaagagtactgggagaatcatt
gtcctgcctgaaggtacgttggagatccgttacgcccaggtaacagacagcggcacttac
atctgcatagcaagcaatgctggtggcaacgatacctactttgccaccctgacagtcagt
ggattgccactggatggttctctggcagcgaatcgcacctactacgtgggtgatctcaat
gacactaacttaaatgacacacgtgtcttcctgaagttcacattggatctcaagaccatc
ctggtgtccacagcaatgggttgtattatgtttttgggtgttgtgcttttctgtttcatt
ctcttgtttgtgtggagccgaggacgaggtcaacacaagaacaatttctcagtagagtat
tcattcagaaaggtagatggtcctgctgccagtgggggtcaaggaggagcacgaaagttt
aacatgaagatgatataa
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