Rhinichthys klamathensis goyatoka (western speckled dace): 130089241
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Entry
130089241 CDS
T09701
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130089241 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130089241 (si:ch73-63e15.2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
130089241
NCBI-ProteinID:
XP_056112446
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MPSLSIPPAMDGHSFSHSDGPQLDARGFVLPAPMSHMFANHPWSFSPQTYSLPCPVQSEN
QQHLFNGPLDMHTDLFPNGISDFDFDFPTLDLSRNGDLSQDLSCLDDLPIFSPTTDSLSV
YTNTDILRTDVTPNVPTIWDIKTPASVQEVNSNRFQGLNSLDDITAIINTPPIGGYQRPQ
TQPEEEEEVEVEEAEELGHVDTYADYRPSKSKIGKSHPDRVVETNTLSSVPPPDITYTLS
IPETTINDGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTVAGIILENY
SKGRKKALWFSVSNDLKYDAERDLQDINAPNIQVHALNKIKYGDTATSEGVLFATYSALI
GESQAGGQHRTRLKQILDWCEPGFDGVIIFDECHKAKNATSTKMGKAVLDLQNKLPLARV
VYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHTIEKRGVGAMEIVAMDMKVSGMY
IARQLSFSGVSFHIEEISLDDDFKLVYNNAAKLWAEALAVFMQAADELCMSSTKSLWGQF
WSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCVVIGLQSTGEARTREVLDENDGRLDRF
VSAAEGVFQSLVLKHFPSEKQRREKGAVNKRKRKPRGRQPKQPRHGTDVVGVINISDDSS
TESDALDSDSNSSPDSVQDNSDDVIFVDQTSYQMARLEEMKKALLNKIAELGKELPLNTL
DELIDKFGGPEKVSEMTGRKGRVVRRSDGTVQYESRAEQGHTIDQINIKEKDRFMNGEKV
VAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIF
LISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDKITKTIL
GQIESKVPPPKEYPGGDAMFFRDMKHGMVDVGMLCSQSRLGINTEKDCNITKFLNRILGL
EVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDQIYEETQEKFLTAGNPQDG
QVILYKISVDRGMPWLEALQKVQNLSNPDEGFYLSHKLRGNYPCVLLAVQGREHNMIIYK
PNIGKQAQMESLDKLQQKYNKVTPEEAQDSWENQFTFSFRKCSHANWNGRCKKIEEGQEC
LMGTRLRQYHMLCGALLRVWKRVSDVVADITSTSILQIVRLKTKDSNKQVGIKIPETCVS
KVRQELLRMDAEVKQRRQEKEQKAQELRQAEEQQRLLVQRQHQEFLLNFFTPSLQAPSLP
TPNISFTPFPSLKTPLEEILDLTVHSTSPSSQVSTQTGLSVDNLTGPPEPSVDDFNIEAF
IQEQQHQQPQQESQSTQESCTARDTDLLDMILSLNSFMTTPSQNDPASSTSDAPLSVPLV
LSSSFSSSMSQFTPTPLTPSSSSSSLSQVSLPPTDMLPLPNSHCSPEAIINAREVLNSML
QSGTEPRYSVIQYQQPE
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgctctcaattccgcctgctatggacgggcacagcttctcacattcggatgga
cctcagctggatgccagggggttcgtcctgccagcccctatgagccacatgtttgctaac
cacccttggagcttctcccctcagacctacagcttgccctgtcctgtgcaatctgaaaac
cagcagcaccttttcaacggcccattagacatgcacacggatttgtttcccaacggcatc
agcgacttcgacttcgacttccccaccctggatctctctcggaacggagacctctctcag
gacctctcttgtctagatgatctaccaatcttctcccctacgaccgactcgttatccgta
tacaccaatactgatatcctcaggactgatgtgacacccaatgtacccacaatatgggac
atcaaaacaccagcatcagtccaagaggtgaattctaacaggtttcaaggtttaaactct
ttggatgacatcactgctatcattaatacaccacccataggaggttatcagagaccccaa
acacagccagaagaggaagaggaagtcgaggtggaggaggctgaagagctgggtcatgtt
gacacctatgcagactacaggccctcaaaatccaagataggaaaatcccacccagaccga
gtggtcgaaaccaacactttatctagcgtacctcctccagatatcacctacaccctgtcc
atcccagagaccaccataaatgacggtctgctctctgctttgcagctggaggccattatc
tatgcctgccagcaacatgaagtgattctgcagaacaaccagcgggccggcttcctcatc
ggggacggcgccggagtgggcaaaggccgcacagtggctggcatcattttagaaaactac
tcaaagggaagaaagaaagcactatggttcagcgtctccaatgacctcaaatatgacgca
gagagagatctccaagacatcaatgcacccaatatacaagtgcatgccttgaataagata
aaatacggagacacagctacctcagaaggggtcctgtttgcgacctactcagcactgatt
ggggagagtcaggcaggcggccaacaccgaacgcgtctaaagcagatcctagactggtgt
gagccgggttttgatggagttattatatttgatgaatgccacaaagccaaaaatgctacg
tccacaaagatgggcaaggccgtgctggatctgcagaacaagttgccattggccagagtg
gtgtacgccagtgccacaggtgcctcagagccaaagaacatgatctacatgagccgtctg
ggaatctggggagagggaacccccttcagaacctttgatgacttcctccacaccattgag
aagaggggtgtgggggccatggagatcgttgcaatggatatgaaggtcagcgggatgtac
attgcacgccaactcagcttctcaggagtttcattccacatagaagagatcagcttggat
gatgatttcaaacttgtgtacaacaatgctgctaaactttgggcggaagctttggctgtg
ttcatgcaggccgctgacgagctctgcatgagctccacgaagtccctgtggggtcagttt
tggtcatcccaccagcgtttctttaaatacctctgcattgccgccaaggtgcgctgcctg
gtggaactggccaaaaaggagttaaaagcaggaaagtgtgttgtgattggcctgcagtca
acaggtgaggctcgaaccagagaagtccttgatgaaaacgatggacgcttagacagattt
gtgtctgctgcagagggtgtgtttcagtctctagtcctcaaacattttccatcagagaag
cagaggagagaaaagggagcggtgaacaagaggaaacgtaagccacggggccgacagcca
aagcaaccccgacacggcactgatgtagttggagttatcaacatcagcgatgacagcagc
accgagtctgacgccttggacagtgactccaactcctcacctgactcggtccaagacaac
agtgatgatgtcatttttgtcgatcaaactagctatcaaatggcacgcttagaggaaatg
aaaaaagcacttctcaacaagatcgctgagctgggaaaagaactaccactcaacacactg
gatgagctcatcgataaatttggaggtccagaaaaagtatcagagatgacgggacgtaaa
ggccgagttgtgcgtcggtctgacggcactgtccaatacgagtcccgcgctgagcagggc
cacaccattgaccaaatcaacatcaaagagaaagatcgcttcatgaatggagagaaggtg
gtagccataatatcagaagcggccagttcagggatctcacttcaggctgacagaagggtg
aagaaccagcgtcgaagggttcacatgaccctggagctgccttggagtgcggacagggcc
atccagcagtttggtcgcactcatcgttccaaccaggtcacagctccagagtatatcttc
cttatctctgaactggcgggcgagcgacgatttgcgtccattgtggcaaagagactggaa
agcctgggagctctgacgcatggtgacaggagggccacagagtctagagacctgagcaaa
tacaactttgaaaataaatatggcaccaaagctctagataagattaccaaaaccatcctt
ggtcagatcgaaagcaaggtaccccctccaaaagaatatcctggtggggacgccatgttc
ttcagagacatgaagcacggtatggtggacgtaggcatgctctgcagtcaatcacggttg
ggcatcaacactgaaaaagactgcaatatcaccaagttcctaaaccggatactgggcctg
gaggtacacaaacagaactccctcttccagtatttcactgacaatttcgactacttgatc
gaaaaggacaagaaagagggcaaatatgacatgggaatactggatctggctccaggcaat
gatcagatctatgaggagacacaggagaagtttctgactgcgggaaatcctcaagatggt
caagttatcctgtacaagataagtgtagatagaggtatgccatggttggaggctctccag
aaggtccaaaatctcagcaacccggatgaaggtttctacttatcccataaattaagaggt
aactacccatgcgtgctgctagctgtgcagggccgggagcacaacatgatcatctacaaa
ccaaacattggcaagcaggcccaaatggaaagccttgataaactccaacaaaaatacaac
aaggtcacaccagaggaggcacaggatagctgggaaaaccagttcactttctccttcagg
aaatgtagccatgctaactggaacgggagatgcaagaagatagaggagggtcaggagtgc
ttaatgggcactcggttgcgtcagtaccacatgttgtgcggtgctctactccgtgtgtgg
aagcgtgtgtctgatgtggtcgctgatatcaccagcaccagcattctacaaattgttcgc
ctcaagaccaaagacagcaacaaacaagttggtataaaaatcccagagacctgcgtgtca
aaggtgcgtcaggagttgctgaggatggatgccgaggtgaagcagcgacgccaagagaag
gagcagaaagcgcaagagctgcgtcaggctgaggaacagcagagactgttggtgcagcgt
cagcatcaagagttcttgttaaatttcttcaccccgtctttgcaagctcccagcttaccc
acccctaacatctccttcacgccgtttccttccctaaaaacccccttggaggaaatcctg
gacctgacagttcacagtacctctccctcctcccaagttagcactcaaactggactgagt
gtagacaacctcactgggccacccgaaccttcggtggatgactttaacattgaagcattt
attcaggagcagcagcatcaacaaccacagcaggagagtcagtccacacaggaaagctgt
acagcacgggacactgacctgctagacatgatactgtccttgaactcatttatgacaacc
cctagccaaaatgaccctgcctcttccacctcagatgcacctttgtcagtacccttggtc
ttgtcaagttccttctcttcttcaatgtcccaattcactccaacgccgctcacaccgtcc
tcatcttcttcctctttgtcgcaagtctctctcccccctacagacatgctcccgttaccg
aacagccactgcagccctgaagccattataaacgcacgggaagttttgaacagcatgctg
caaagtggaacagaaccacgctactccgtcattcagtaccaacaacccgagtga
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integrated database retrieval system
