KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130089247
Entry
130089247         CDS       T09701                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03020  RNA polymerase
rkg03420  Nucleotide excision repair
rkg04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130089247 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130089247 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    130089247 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rkg03021]
    130089247 (polr2eb)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130089247 (polr2eb)
Transcription machinery [BR:rkg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130089247 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     130089247 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     130089247 (polr2eb)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130089247 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 130089247
NCBI-ProteinID: XP_056112458
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaggaagagacttacagactatggaaaattaggaaaactataatgcagctt
tgccacgatcgtggttatttggtgacgcaagatgagctggatcagactcttgatgagttc
agaagccagtttggagacaaacccagtgagggtcgacctcgacgaaccgacctcactgtc
ctggtcgcccacaacgacgatccaaccgaccagatgtttgtgttcttccctgaggaacca
aaggttggcatcaaaaccataaagatgtattgtcagcgtatgcaggaagaaaacatcact
cgggccattattgtagtccagatgggcatgacgccctccgccaaacagtctctggtagac
atggcgccaaagtacatacttgagcagtttcttcagcaggagcttctaatcaacattact
gaacacgagcttgttccagagcacatagtgatgactaaagaggaagtaaccgagttgctg
gcgcgatataaactaaaggaaagccagcttcccagaattcaagctggggatcccgtcgcc
cgttactttggcttaaaaagaggccaggttgttaagatcatcagaccgagtgaaactgct
ggacggtacatcacatacagattggtccagtaa

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