Rhinichthys klamathensis goyatoka (western speckled dace): 130089288
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Entry
130089288 CDS
T09701
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130089288 (trmt13)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
130089288 (trmt13)
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130089288 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7795
Motif
Other DBs
NCBI-GeneID:
130089288
NCBI-ProteinID:
XP_056112533
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MEGSTADGVSAPLPGRCAFYVVKKKRYCKMIVGSGKTFCGEHANAGEESEKKRIPCPLDP
KHTVFEDNLAKHLKKCNSKEKPKPIYYVKDINAGCENQDETIDEISIADRSKEELDELIV
KLKTALQGLNTKLVETTLSHSALYEPLNDPKNGDSAFKHLKQQASILGNMEVLELLSPNR
CYIEFGAGKGKLSHWIHIALKAAENVHFLLVERSSTRFKVDGKHKNADSTFDRLQVDIQH
LDLLKVPLLREKRLPVIGVGKHLCGAATGRLEFNKLHKYYHGISPARLMYQLISTDLALR
CLFEHNCIDKDDDPPTKRVKLNHTEGAGDDMKPVPSTEGRETGEELIVSGLAIALCCHHR
CDWRHYVGKEFFRQKGLGPEEFAAFQRMSSWATCGMRKFSSKITEKTGEEEEHEMSEEAV
PDTLNGLMSVEDREQIGRLCKHLIDHGRVYYLQQKGFKTSLRYYTSRDVSLENVLLTAIP
TANQNRDESKQPS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagggatccacagcggacggcgtgtcagcgcctttacctggacgatgtgctttttat
gtagtaaaaaagaaacgatactgcaagatgattgttggaagtgggaaaaccttctgcggg
gaacatgcaaatgctggcgaagagagtgagaaaaaacgaatcccctgtcctttggacccc
aaacacactgtatttgaagataatttggctaaacacctgaagaaatgtaactccaaggag
aaaccaaaacctatttattacgtgaaggacatcaatgctgggtgtgaaaatcaagatgaa
accatagatgagatatccattgctgatcgatccaaagaggaactggatgagttgatagtg
aaactcaaaactgcattacaaggtctaaataccaaactcgtggaaacaacactctcacat
tctgctctatatgagcctctaaatgacccaaagaatggagattctgcttttaaacacctc
aagcaacaggcctctattcttggaaacatggaggttttggaactgctcagcccaaacaga
tgctacatagagtttggggcagggaagggaaaactgtcccattggattcacattgctctt
aaagcagctgaaaatgtccattttttacttgtggaaaggtccagtactcgctttaaggta
gatggcaagcacaaaaatgcagactcgacttttgataggcttcaggttgatattcagcac
cttgatttactgaaagttcctctcctgagagaaaagcgacttcctgttattggtgttggg
aagcacctctgtggtgcagcaactggtagactagaattcaataaacttcataaatattat
catggtattagtcctgcaagattgatgtatcaacttatatccacagatctggcccttcgg
tgtttatttgagcacaactgcattgacaaagatgatgaccctcctaccaagcgtgtaaaa
cttaatcatacggagggtgctggtgatgatatgaagcctgttccctcaaccgaaggcagg
gaaactggtgaagagctcatagtgtcaggactggccatcgctctttgctgccaccaccgt
tgcgactggagacactacgtgggaaaagagttcttcagacagaaaggtcttggaccagaa
gagtttgctgctttccagcgcatgtcgagctgggccacttgcggtatgagaaaattcagc
tccaagataacagaaaaaacaggcgaagaggaagaacatgagatgagcgaggaagctgtg
ccagatacccttaacggtttgatgtcagttgaagatcgggaacagatcgggcggctttgt
aagcacctgattgaccatggaagagtgtattacctccagcaaaaaggctttaaaaccagt
ctgagatactacacaagcagagatgtgtcattggagaatgtgttactaactgccattccc
acagccaatcagaatagagatgaatctaaacagccttcttaa
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